Fraunhofer-Institut für Zelltherapie und Immunologie IZI
Fraunhofer-Institut für Zelltherapie und Immunologie IZI

Publikationsliste

Publikationen 2023

  • Adamowicz K, Arend L, Maier A, Schmidt J R, Kuster B, Tsoy O, Zolotareva O, Baumbach J, Laske T. Proteomic meta-study harmonization, mechanotyping and drug repurposing candidate prediction with ProHarMeD. NPJ Syst Biol Appl 2023, 9(1): 49. doi: 10.1038/s41540-023-00311-7
  • Agarwal B, Cañizares RB, Saliba F, Ballester MP, Tomescu DR, Martin D, Stadlbauer V, Wright G, Sheikh M, Morgan C, Alzola C, Lavin P, Green D, Kumar R, Sacleux SC, Schilcher G, Koball S, Tudor A, Minten J, Domenech G, Aragones JJ, Oettl K, Paar M, Waterstradt K, Bode-Boger SM, Ibáñez-Samaniego L, Gander A, Ramos C, Chivu A, Stange J, Lamprecht G, Sanchez M, Mookerjee RP, Davenport A, Davies N, Pavesi M, Andreola F, Albillos A, Cordingley J, Schmidt H, Carbonell-Asins JA, Arroyo V, Fernandez J, Mitzner S, Jalan R. Randomized, controlled clinical trial of the DIALIVE liver dialysis device versus standard of care in patients with acute-on- chronic liver failure. J Hepatol. 2023, Jul;79(1): 79-92. doi: 10.1016/j.jhep.2023.03.013
  • Ammar D, Schapitz I, Luu M, Hudecek M, Meyer M, Taps T, Schröder B, Ivics Z, Sanges C, Franz P, Koehl U, Negre H, Johanna I, Awigena-Cook J. Accelerating development of engineered T cell therapies in the EU: current regulatory framework for studying multiple product versions and T2EVOLVE recommendations. Front Immunol. 2023, Nov, 14: 1280826. doi: 10.3389/fimmu.2023.1280826
  • Anders I M, Schimmelpfennig C, Wiedemann K, Löffler D, Kämpf C, Blumert C, Reiche K, Kunz M, Anderegg U, Simon J-C, Ziemer M. Atypical fibroxanthoma and pleomorphic dermal sarcoma – gene expression analysis compared with undifferentiated cutaneous squamous cell carcinoma. J Dtsch Dermatol Ges 2023, 21 (5): 482-491. doi: 10.1111/ddg.15006
  • Auw N von, Serfling R, Kitte R, Hilger N, Zhang C, Gebhardt C, Dünkel A, Franz P, Köhl U, Fricke S, Tretbar SU. Comparison of two lab-scale protocols for enhanced mRNA-based CAR-T cell generation and functionality. Sci Rep 2023, 13 (1), article 18160. doi: 10.1038/s41598-023-45197-x
  • Bache M, Kadler F, Struck O, Medenwald D, Ostheimer C, Güttler A, Keßler J, Kappler M, Riemann A, Thews O, Seliger B, Vordermark D. Correlation between circulating miR-16, miR-29a, miR-144 and miR-150, and the radiotherapy response and survival of non-small-cell lung cancer patients. Int J Mol Sci 2023, 24 (16), article 12835. doi: 10.3390/ijms241612835
  • Barendrecht S, Schreurs A, Geißler S, Sabanov V, Ilse V, Rieckmann V, Eichentopf R, Künemund A, Hietel B, Wussow S, Hoffmann K, Körber-Ferl K, Pandey R, Carter G W, Demuth H-U, Holzer M, Roßner S, Schilling S, Preuss C, Balschun D, Cynis H. A novel human tau knock-in mouse model reveals interaction of Abeta and human tau under progressing cerebral amyloidosis in 5xFAD mice. Alzheimers Res Ther 2023, 15 (1), article 16. doi: 10.1186/s13195-022-01144-y
  • Bentler M, Hardet R, Ertelt M, Rudolf D, Kaniowska D, Schneider A, Vondran F W R, Schoeder C T, Delphin M, Lucifora J, Ott M, Hacker U T, Adriouch S, Büning H. Modifying immune responses to adeno-associated virus vectors by capsid engineering. Mol Ther Methods Clin Dev 2023, 30: 576-592. doi: 10.1016/j.omtm.2023.08.015
  • Blache U, Tretbar S, Koehl U, Mougiakakos D, Fricke S. CAR T cells for treating autoimmune diseases. RMD open 2023, 9 (4): e002907. doi: 10.1136/rmdopen-2022-002907
  • Blaudszun A-R, Kim W J, Um W, Yoon H Y, Shim M K, Kim K. Adoptive transfer of photosensitizer-loaded cytotoxic T cells for combinational photodynamic therapy and cancer immuno-therapy. Pharmaceutics. 2023,15 (4): 1295. doi: 10.3390/pharmaceutics15041295
  • Böhm K, Schulze-Niemand E, Kähne T, Siddiqui E, Täger C, Ramsbeck D, Buchholz M, Naumann M. Synthesis and structure–activity relationships of USP48 deubiquitinylase inhibitors. Arch Pharm 2023, 356 (7), article: 2200661. doi: 10.1002/ardp.202200661
  • Broséus J, Hergalant S, Vogt J, Tausch E, Kreuz M, Mottok A, Schneider C, Dartigeas C, Roos-Weil D, Quinquenel A, Moulin C, Ott G, Blanchet O, Tomowiak C, Lazarian G, Rouyer P, Chteinberg E, Bernhart SH, Tournilhac O, Gauchotte G, Lomazzi S, Chapiro E, Nguyen-Khac F, Chery C, Davi F, Hunault M, Houlgatte R, Rosenwald A, Delmer A, Meyre D, Béné MC, Thieblemont C, Lichter P, Ammerpohl O, Guéant JL; ICGC MMML-Seq Consortium; Guièze R, Martin-Subero JI, Cymbalista F, Feugier P, Siebert R, Stilgenbauer S. Molecular characterization of Richter syndrome identifies de novo diffuse large B-cell lymphomas with poor prognosis. Nat Commun. 2023, 14 (1): 309. doi: 10.1038/s41467-022-34642-6
  • Caballero L R, Treudler R, Delaroque N, Simon J C, Kern K, Szardenings M. Peptide epitopes as biomarkers of soya sensitization in rBet v 1 immunotherapy of birch-related soya allergy. Clin Exp Allergy 2023, 53 (3): 316-326. doi: 10.1111/cea.14224
  • Chilingaryan G, Izmailyan R, Grigoryan R, Shavina A, Arabyan E, Khachatryan H, Abelyan N, Matevosyan M, Harutyunyan V, Manukyan G, Hietel B, Shtro A, Danilenko D, Zakaryan H. Advanced virtual screening enables the discovery of a host-targeting and broad-spectrum antiviral agent. Antiviral Res 2023, 217, article 105681. doi: 10.1016/j.antiviral.2023.105681
  • Ciulean I S, Fischer J, Quaiser A, Bach C, Abken H, Tretbar U S, Fricke S, Köhl U, Schmiedel D, Grunwald T. CD44v6 specific CAR-NK cells for targeted immunotherapy of head and neck squamous cell carcinoma. Front Immunol 2023, 14: 1290488. doi: 10.3389/fimmu.2023.1290488
  • Dzhambazov B, Batsalova T, Merky P, Lange F, Holmdahl R. NIH/3T3 fibroplasts selectively activate T cells specific for posttranslationally modified collagen type II. Int J Mol Sci 2023, 24 (13), article: 10811. doi: 10.3390/ijms241310811
  • Eberlein V, Ahrends M, Bayer L, Finkensieper J, Besecke J K, Mansuroglu Y, Standfest B, Lange F, Schopf S, Thoma M, Dressman J, Hesse C, Ulbert S, Grunwald T. Mucosal application of a low-energy electron inactivated respiratory syncytial virus vaccine shows protective efficacy in an animal model. Viruses 2023, 15 (9), article 1846. doi: 10.3390/v15091846
  • Engel C, Wirkner K, Zeynalova S, Baber R, Binder H, Ceglarek U, Enzenbach C, Fuchs M, Hagendorff A, Henger S, Hinz A, Rauscher FG, Reusche M, Riedel-Heller SG, Röhr S, Sacher J, Sander C, Schroeter ML, Tarnok A, Treudler R, Villringer A, Wachter R, Witte AV, Thiery J, Scholz M, Loeffler M; LIFE-Adult-Study working group. Cohort Profile: The LIFE-adult-study. Int J Epidemiol 2023, 52 (1): E66 - E791. doi: 10.1093/ije/dyac114
  • Feigl F F, Stahringer A, Peindl M, Dandekar G, Köhl U, Fricke S, Schmiedel D. Efficient redirection of NK cells by genetic modification with chemokine receptors CCR4 and CCR2B. Int J Mol Sci 2023, 24 (4), article 3129. doi: 10.3390/ijms24043129
  • Finkensieper J, Mayerle F, Rentería-Solís Z, Fertey J, Makert G R, Lange F, Besecke J, Schopf S, Poremba A, König U, Standfest B, Thoma M, Daugschies A, Ulbert S. Apicomplexan parasites are attenuated by low energy electron irradiation in an automated microfluidic system and protect against infection with Toxoplasma gondii. Parasitol Res, 2023, 122(8): 1819-1832. doi: 10.1007/s00436-023-07880-w
  • Freitag J S, Möser C, Belay R, Altattan B, Grasse N, Pothineni B K, Schnauß J, Smith D M. Integration of functional peptides into nucleic acid-based nanostructures. Nanoscale 2023, 15 (17): 7608-7624. doi: 10.1039/d2nr05429a
  • Glaser M, Mollenkopf P, Prascevic D, Ferraz C, Käs J A, Schnauß J, Smith D M. Systematic altering of semiflexible DNA-based polymer networks via tunable crosslinking. Nanoscale. 2023, 15 (16): 7374-7383. doi: 10.1039/d2nr05615a
  • Glatte B, Wenk K, Grahnert A, Friedrich M, Merz M, Vucinic V, Fischer L, Reiche K, Alb M, Hudecek M, Franz P, Fricke S, Platzbecker U, Koehl U, Sack U, Boldt A, Hauschildt S, Weiss R. Teclistamab impairs detection of BCMA CAR-T cells. Blood Adv 2023, 7 (15): 3842-3845. doi: 10.1182/bloodadvances.2023009714
  • Han Y, Zhao J, Chao Z, Liang K, Zhang C, Jiang L, Jiao Z, Bai F, Tarnok A, You Z. Imaging flow cytometry using linear array spot excitation. Device 2023, 1 (6): 100124. doi: 10.1016/j.device.2023.100124
  • He J, Shi Q, Chen Z, Zhang W, Lan P, Xu Q, Hu H, Chen Q, Jianzhong F, Jiang Y, Loh B W-C, Lepthin S, Zou Q, Zhang J, Yu Y, Hua X. Opposite evolution of pathogenicity driven by in vivo wzc and wcaJ mutations in ST11-KL64 carbapenem-resistant Klebsiella pneumoniae. Drug Resist Updat. 2023, 66: 100891. doi: 10.1016/j.drup.2022.100891
  • Hilali N, Hangouët M, Bausells J, Kern K, Ramirez-Caballero L, Szardenings M, Polonschii Cristina, Mohammadi H, Amime A, Zine N, Errachid A. Fast impedimetric immunosensing of IgGs associated with peanut and hazelnut allergens. Biosens Bioelectron 2023, 242, article: 115612. doi: 10.1016/j.bios.2023.115612
  • Hoen L, Pfeffer D, Schmidt J R, Kraft J, Hildebrand J, Kalkhof S. Hydration status of geriatric patients is associated with changes in plasma proteome, especially in proteins involved in coagulation. Nutrients 2023, 15 (17), article 3789. doi: 10.3390/nu15173789
  • Issmail L, Ramsbeck D, Jäger C, Henning T, Kleinschmidt M, Buchholz M, Grunwald T. Identification and evaluation of a novel tribenzamide derivative as an inhibitor targeting the entry of the respiratory syncytial virus. Antiviral Res 2023, article 105547. doi: 10.1016/j.antiviral.2023.105547
  • Kern K, Delaroque N, Boysen A, Puder M, Wendt R, Kölsch A, Ehrentreich-Förster E, Staerk K, Andersen T E, Andersen K, Lund L, Szardenings M. Glycosylation of bacterial antigens changes epitope patterns. Front Immunol 2023, 14: 1258136. doi: 10.3389/fimmu.2023.1258136
  • Kiefer N, Nichterlein M, Reiß F, Runge M, Biermann U, Wieland T, Noll M, Kalkhof S. Eluates from façades at the beginning of their service time affect aquatic and sediment organisms. Sci Total Environ 2023, 906, article 167531. doi: 10.1016/j.scitotenv.2023.167531
  • Kitte R, Rabel M, Geczy R, Park S, Fricke S, Koehl U, Tretbar SU. Lipid nanoparticles outperform electroporation in mRNA-based CAR T cell engineering. Mol Ther Methods Clin Dev, 2023, 31: 101139. doi: 10.1016/j.omtm.2023.101139
  • Klinkmann G, Waterstradt K, Klammt S, Schnurr K, Schewe J-C, Wasserkort R, Mitzner S. Exploring albumin functionality assays: a pilot study on sepsis evaluation in intensive care medicine. Int J Mol Sci 2023, 24 (16), article 12551. doi: 10.3390/ijms241612551
  • Klinkmann G, Wild T, Heskamp B, Doss F, Doss S, Milej M, Thiele L-M, Goudeva L, Blasczyk R, Reuter D, Altrichter J, Mitzner S. Extracorporeal therapy of sepsis by purified granulocyte concentrates—ex vivo circulation model. Artifical Organs 2023, 47 (7): 1151-1162. doi: 10.1111/aor.14507
  • Lozada-Chávez I, Lozada-Chávez A N, Stadler P F, Prohaska S J. The genomes of complex multicellular organisms on Earth are characterized by high intron-richness. Revista mexicana de astronomía y astrofísica 2023, 55. doi: 10.22201/ia.14052059p.2023.55.14
  • Massa C, Seliger B. Combination of multiple omics techniques for a personalized therapy or treatment selection. Front Immunol 2023, 14, article 1258013. doi: 10.3389/fimmu.2023.1258013
  • Massa C, Wang Y, Marr N, Seliger B. Interferons and resistance mechanisms in tumors and pathogen-driven diseases - focus on the major histocompatibility complex (MHC) antigen processing pathway. Int J Mol Sci 2023, 24 (7), article 6736. doi: 10.3390/ijms24076736 
  • Messer E K, Meyer A L, Klaeske K, Sieg F, Eifert S, Schmiedel D, Haunschild J, Jawad K, Saeed D, Hildebrandt L, Borger M A, Dieterlen M-T. The impact of obesity on T and NK cells after LVAD implantation. Obes Facts 2023, 16 (4): 364-373. doi: 10.1159/000530174
  • Mollenkopf P, Prascevic D, Bayerl T M, Käs J A, Schnauß J. Heavy water induces bundling in entangled actin networks. RSC Adv 2023, 13 (35): 24795-24800. doi: 10.1039/d3ra03917j
  • Mötzing M, Blüher M, Grunwald T, Hoffmann R. Immunological quantitation of the glycation site Lysine‐414 in serum albumin in human plasma samples by indirect ELISA using highly specific monoclonal antibodies. ChemBioChem 2023, online ahead of print, article e202300550. doi: 10.1002/cbic.202300550
  • Mytzka N, Arbaciauskaite S, Sandetskaya N, Mattern K, Kuhlmeier D. A fully integrated duplex RT‑LAMP device for the detection of viral infections. Biomed Microdevices 2023, 25 (4), article 36. doi: 10.1007/s10544-023-00676-w 
  • Nowak J, Bentele M, Kutle I, Zimmermann K, Lühmann J K, Steinemann D, Kloess S, Köhl U, Roßberg W, Ahmed A, Schaudien D, Neubert L, Kamp J-C, Kuehnel M P, Warnecke A, Schambach A, Morgan M. CAR-NK cells targeting HER1 (EGFR) show efficient anti-tumor activity against head and neck squamous cell carcinoma (HNSCC). Cancers (Basel) 2023, 15 (12), article 3169. doi: 10.3390/cancers15123169
  • Quint I, Simantzik J, Kaiser L, Laufer S, Csuk R, Smith D, Kohl M, Deigner H-P. Ready-to-use nanopore platform for label-free small molecule quantification: ethanolamine as first example. Nanomedicine 2023, online aheas of print, article 102724. doi: 10.1016/j.nano.2023.102724
  • Rade M, Böhlen S, Neuhaus V, Löffler D, Blumert C, Merz M, Köhl U, Dehmel S, Sewald K, Reiche K. A time-resolved meta-analysis of consensus gene expression profiles during human T-cell activation. Genome Biol. 2023, 24(1): 287. doi: 10.1186/s13059-023-03120-7
  • Rauch-Wirth L, Renner A, Kaygisiz K, Zimmermann L, Rodríguez Alfonso AA, Schütz D, Wiese S, Ständker L, Weil T, Schmiedel D,  Münch J. Optimized peptide nanofibrils as efficient transduction enhancers for in vitro and ex vivo gene transfer. Front Immunol. 2023, 14:1270243. doi: 10.3389/fimmu.2023.1270243
  • Rentschler S, Borgolte M, Filbert A, Laufer S, Deigner H-P. Highly efficient β-lactamase assay applying poly-dimethylacrylamide-based surface functionalization with β-lactam antibiotics and β-lactamase inhibitors. Lab Chip 2023, 23 (24): 5120-5130. doi: 10.1039/d3lc00682d
  • Reus P, Guthmann H, Uhlig N, Agbaria M, Issmail L, Eberlein V, Nordling-David MM, Jbara-Agbaria D, Ciesek S, Bojkova D, Cinatl J, Burger-Kentischer A, Rupp S, Zaliani A, Grunwald T, Gribbon P, Kannt A, Golomb G. Drug repurposing for the treatment of COVID-19: Targeting nafamostat to the lungs by a liposomal delivery system. J Control Release 2023, 364: 654-671. doi: 10.1016/j.jconrel.2023.10.050
  • Salti H, Kramer L, Nelz S-C, Lorenz M, Breitrück A, Hofrichter J, Frank M, Schulz K, Mitzner S, Wasserkort R. Decellularization of precision-cut kidney slices-application of physical and chemical methods. Biomed Mater 2023, 18 (2), article 025004. doi: 10.1088/1748-605X/acb02e
  • Schäfer H, Subbarayan K, Massa C, Vaxevanis C, Mueller A, Seliger B. Correlation of the tumor escape phenotype with loss of PRELP expression in melanoma. J Transl Med 2023, 21, article 643. doi: 10.1186/s12967-023-04476-x
  • Schimmelpfennig C, Rade M, Füssel S, Löffler D, Blumert C, Bertram C, Borkowetz A, Otto D J, Puppel S-H, Hönscheid P, Sommer U, Baretton G B, Köhl U, Wirth M, Thomas C, Horn F, Kreuz M, Reiche K. Characterization and evaluation of gene fusions as a measure of genetic instability and disease prognosis in prostate cancer. BMC Cancer 2023, 23, article 575. doi: 10.1186/s12885-023-11019-6
  • Schmidt J R, Haupt J, Riemschneider S, Kämpf C, Löffler D, Blumert C, Reiche K, Koehl U, Kalkhof S, Lehmann J. Transcriptomic signatures reveal a shift towards an anti-inflammatory gene expression profile but also the induction of type I and type II interferon signaling networks through aryl hydrocarbon receptor activation in murine macrophages. Front Immunol 2023, 14: article number 1156493. doi: 10.3389/fimmu.2023.1156493
  • Schulz J, Schilling E, Fabian C, Zenclussen A C, Stojanovska V, Claus C. Dissecting rubella placental infection in an In vitro trophoblast model. Int J Mol Sci, 2023, 24(9), article number 7894. doi: 10.3390/ijms24097894
  • Szardenings M, Delaroque N, Kern K, Ramirez-Caballero L, Puder M, Ehrentreich-Förster E, Beige J, Zürner S, Popp G, Wolf J, Borte S. Detection of antibodies against endemic and SARS-CoV-2 coronaviruses with short peptide epitopes. Vaccines 2023, 11 (9), article 1403, doi: 10.3390/vaccines11091403
  • Tan K, Jäger C, Geissler S, Schlenzig D, Buchholz M, Ramsbeck D. Synthesis and structure–activity relationships of pyrazole-based inhibitors of meprin α and β. J Enzyme Inhib Med Chem. 2023, 38 (1): 2165648. doi: 10.1080/14756366.2023.2165648
  • Tanuchai B, Ji L, Schröder O, Gawol S J, Geissler A, Wahdan S F M, Buscot F, Kalkhof S, Schulze E-D, Noll M, Purahong W. Fate of a biodegradable plastic in forest soil: dominant tree species and forest types drive changes in microbial community assembly, influence the composition of plastisphere, and affect poly(butylene succinate-co-adipate) degradation. Sci Total Environ 2023, 873: article 162230. doi: 10.1016/j.scitotenv.2023.162230
  • Thaher B A, Al-Masri I, Wahedy K, Morjan R, Aliwaini S, Al atter I M, Elmabhouh A A, Al Ibwaini A K, Alkhaldi S L, Qeshta B, Jacob C, Deigner H-P. Synthesis and bioassay of 3-Aryl -1-(pyridin-4-yl)benzo[4,5]imidazo[1,2-d][1,2,4]- triazin-4(3H)-ones as anti-cancer agents. Naunyn Schmiedebergs Arch Pharmacol. 2023, 396(8): 1797-1810. doi: 10.1007/s00210-023-02433-5
  • Tong L, Kremer V, Neo SY, Liu Y, Chen Y, Wagner AK, Yang Y, Chen Z, Seitz C, Tobin NP, Ligtenberg MA, Alici E, Chen X, Haglund F, Seliger B, Harmenberg U, Colón E, Plogell AS, Liu LL, Lundqvist A. Renal cell carcinoma escapes NK cell-mediated immune surveillance through the downregulation of DNAM-1. Cancer Commun (Lond.) 2023, 43 (7): 855-859. doi: 10.1002/cac2.12446  
  • Vaxevanis C K, Bauer M, Subbarayan K, Friedrich M, Massa C, Biehl K, Al-Ali H K, Wickenhauser C, Seliger B. Biglycan as a mediator of proinflammatory response and target for MDS and sAML therapy. OncoImmunology 2023, 12 (1), article 2152998. doi: 10.1080/2162402X.2022.2152998
  • Vogelsberg E, Moors M, Sorokina A S, Ryndyk D A, Schmitz S, Freitag J S, Subbotina A V, Heine T, Abel B, Monakhov K Y. Solution-processed formation of DNA-origami-supported polyoxometalate multi-level Switches with countercation-controlled conductance tunability. Chem Mater 2023, 35 (14). doi: 10.1021/acs.chemmater.3c00776
  • Wang N, Lei T, Zhu Y, Li Y, Cai H, Zhang P, Leptihn S, Zhou J, Ke H, Gao B, Feng Y, Hua X, Qu T. Characterization of two novel VIM-type metallo-β-lactamases, VIM-84 and VIM-85, associated with the spread of IncP-2 megaplasmids in Pseudomonas aeruginosa. Microbiol Spectr 2023, 11 (5), article e0154423. doi: 10.1128/spectrum.01544-23
  • Wang Y, He J, Sun L, Jiang Y, Hu L, Leptihn S, Zhu P, Fu X, Yu Y, Hua X. IS26 mediated blaCTX-M-65 amplification in Escherichia coli increase the antibiotic resistance to cephalosporin in vivo. J Glob Antimicrob Resist 2023, 35: 202-209. doi: 10.1016/j.jgar.2023.09.018
  • Wang Y, Jasinski-Bergner S, Wickenhauser C, Seliger B. Cancer immunology: immune escape of tumors - expression and regulation of HLA class I molecules and its role in immunotherapies. Adv Anat Pathol 2023, 30 (3): 148-159. doi: 10.1097/PAP.0000000000000389
  • Weiß R, Issmail L, Rockstroh A, Grunwald T, Fertey J, Ulbert S. Immunization with different recombinant West Nile virus envelope proteins induces varying levels of serological cross-reactivity and protection from infection. Front Cell Infect Microbiol, 2023, 13: 1279147. doi: 10.3389/fcimb.2023.1279147
  • Zhang X, Greiser S, Roy U, Lange F, Gorkum R v, Fournelle M, Speicher D, Tretbar S, Melzer A, Landgraf L. Evaluation of a developed MRI-guided focused ultrasound system in 7 T small animal MRI and proof-of-concept in a prostate cancer xenograft model to improve radiation therapy. Cells 2023, 12 (3), article 481, doi: 10.3390/cells12030481

Publikationen 2022

  • Alaneed R, Naumann M, Pietzsch M, Kressler J. Microbial transglutaminase-mediated formation of erythropoietin-polyester conjugates. J Biotechnol. 2022 Feb 20;346:1-10. doi: 10.1016/j.jbiotec.2022.01.001. Epub 2022 Jan 15. 
  • Allelein S, Aerchlimann K A, Roesch G, Khajehamiri R, Koelsch A, Freese C, Kuhlmeier D. Prostate-specific membrane antigen (PSMA)-positive extracellular vesicles in urine - a potential liquid biopsy strategy for prostate cancer diagnosis? Cancers (Basel). 2022 Jun 17;14(12):2987. doi: 10.3390/cancers14122987
  • Arbaciauskaite S, Babakhani P, Sandetskaya N, Vitkus D, Jancoriene L, Karosiene D, Karciauskaite D, Zablockiene B, Kuhlmeier D. Self-sampled gargle water direct RT-LAMP as a screening method for the detection of SARS-CoV-2 infections. Diagnostics (Basel). 2022 Mar 22;12(4):775. doi: 10.3390/diagnostics12040775 
  • Arteaga V G, Demand V, Kern K, Strube A, Szardenings M, Muranyi I, Eisner P, Schweiggert-Weisz U. Enzymatic hydrolysis and fermentation of pea protein isolate and its effects on antigenic proteins, functional properties, and sensory profile. Foods. 2022 Jan 4;11(1):118. doi: 10.3390/foods11010118 
  • Arumugam S N, Manohar P, Sukumaran S, Sadagopan S, Loh B, Leptihn S, Nachimuthu R. Antibacterial efficacy of lytic phages against multidrug-resistant Pseudomonas aeruginosa infections in bacteraemia mice models. BMC Microbiol. 2022 Aug 1;22(1):187. doi: 10.1186/s12866-022-02603-0 
  • Bathini P, Sun T, Schenk M, Schilling S, McDannold N J, Lemere C A. Acute effects of focused ultrasound-induced blood-brain barrier opening on anti-pyroglu3 abeta antibody delivery and immune responses. Biomolecules. 2022 Jul 6;12(7):951. doi: 10.3390/biom12070951 
  • Bäumer N, Scheller A, Wittmann L, Faust A, Apel M, Nimmagadda SC, Geyer C, Grunert K, Kellmann N, Peipp M, Kailayangiri S, Ezequiel Gutierrez Suburu ME, Strassert CA, Schenk M, Greune L, Rüter C, Dersch P, Hartmann W, Rossig C, Neri D, Müller-Tidow C, Schwöppe C, Schliemann C, Khandanpour C, Lenz G, Berdel WE, Bäumer S. Electrostatic anti-CD33-antibody-protamine nanocarriers as platform for a targeted treatment of acute myeloid leukemia. J Hematol Oncol. 2022 Dec 1;15(1):171. doi: 10.1186/s13045-022-01390-5 
  • Bayly-Jones C, Lupton C J, Fritz C, Venugopal H, Ramsbeck D, Wermann M, Jaeger C, Marco A de, Schiling S, Schlenzig D, Whisstock J C. Helical ultrastructure of the metalloprotease meprin α in complex with a small molecule inhibitor. Nat Commun. 2022 Oct 19;13(1):6178. doi: 10.1038/s41467-022-33893-7 
  • Beckmann L, Tretbar S, Kitte R, Tretbar M. Anticancer activity of natural and semi-synthetic drimane and coloratane sesquiterpenoids. Molecules. 2022 Apr 13;27(8):2501. doi: 10.3390/molecules27082501 
  • Berneck B S, Rockstroh A, Barzon L, Sinigaglia A, Vocale C, Landini M P, Rabenau H F, Schmidt-Chanasit J, Ulbert S. Serological differentiation of West Nile virus- and Usutu virus-induced antibodies by envelope proteins with modified cross-reactive epitopes. Transbound Emerg Dis. 2022 Sep;69(5):2779-2787. doi: 10.1111/tbed.14429. Epub 2022 Jan 10 
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  • Strobelt R, Adler J, Paran N, Yahalom-Ronen Y, Melamed S, Politi B, Shulman Z, Schmiedel D, Shaul Y. Imatinib inhibits SARS-CoV-2 infection by an off-target-mechanism. Sci Rep. 2022 Apr 6;12(1):5758. doi: 10.1038/s41598-022-09664-1 
  • Subbarayan K, Massa C, Leisz S, Steven A, Bethmann D, Biehl K, Wickenhauser C, Seliger B. Biglycan as a potential regulator of tumorgenicity and immunogenicity in K-RAS-transformed cells. Oncoimmunology. 2022 Apr 28;11(1):2069214. doi: 10.1080/2162402X.2022.2069214. eCollection 2022 
  • Subirana M A, Riemschneider S, Hause G, Dobritzsch D, Schaumloeffel D, Herzberg M. High spatial resolution imaging of subcellular macro and trace element distribution during phagocytosis. Metallomics. 2022 Apr 1;14(4):mfac011. doi: 10.1093/mtomcs/mfac011 
  • Taha A, Bobi J, Dammers R, Dijkhuizen R M, Dreyer A Y, Es A C G M, Ferrara F, Gounis M J, Nitzsche B, Platt S, Stoffel M H, Volovici V, Zoppo G J, Duncker D J, Dippel D W J, Boltze J, Beusekom H M M. Comparison of large animal models for acute ischemic stroke: which model to use? Stroke. 2022 Apr;53(4):1411-1422. doi: 10.1161/STROKEAHA.121.036050. Epub 2022 Feb 15 
  • Toma G, Karapetian E, Massa C, Quandt D, Seliger B. Characterization of the effect of histone deacetylation inhibitors on CD8+ T cells in the context of aging. J Transl Med. 2022 Nov 22;20(1):539. doi: 10.1186/s12967-022-03733-9 
  • Toma G, Lemnian IM, Karapetian E, Grosse I, Seliger B. Transcriptional Analysis of Total CD8+ T Cells and CD8+CD45RA- Memory T Cells From Young and Old Healthy Blood Donors. Front Immunol. 2022 Jan 27;13:806906. doi: 10.3389/fimmu.2022.806906. eCollection 2022 
  • Wagner D L, Koehl U, Chmielewski M, Scheid C, Stripecke R. Review: sustainable clinical development of CAR-T cells - switching from viral transduction towards CRISPR-Cas gene editing. Front Immunol. 2022 Jun 17;13:865424. doi: 10.3389/fimmu.2022.865424. eCollection 2022 
  • Weil T, Kirupakaran A, Le M-H, Rebmann P, Mieres-Perez J, Issmail L, Conzelmann C, Mueller J A, Rauch L, Gilg A, Wettstein L, Groß R, Read C, Bergner T, Axberg Pålsson S, Uhlig N, Eberlein V, Woell H, Klaerner F-G, Stenger S, Kuemmerer B M, Streeck H, Fois G, Frick M, Braubach P, Spetz A-L, Grunwald T, Shorter J, Sanchez-Garcia E, Schrader T, Muench J. Advanced molecular tweezers with lipid anchors against SARS-CoV-2 and other respiratory viruses. JACS Au. 2022 Sep 6;2(9):2187-2202. doi: 10.1021/jacsau.2c00220. eCollection 2022 Sep 26 
  • Werner M, Dyas A, Parfentev I, Schmidt G E, Mieczkowska I K, Mueller-Kirschbaum L C, Mueller C, Kalkhof S, Reinhardt O, Urlaub H, Alves F, Gallwas J, Prokakis E, Wegwitz F. ROBO3s: a novel ROBO3 short isoform promoting breast cancer aggressiveness. Cell Death Dis. 2022 Sep 3;13(9):762. doi: 10.1038/s41419-022-05197-7 
  • Zhang L, Wang X, Hua X, Yu Y, Lepthin S, Loh B. Therapeutic evaluation of the Acinetobacter baumannii phage Phab24 for clinical use. Virus Res. 2022 Oct 15;320:198889. doi: 10.1016/j.virusres.2022.198889. Epub 2022 Aug 12

Publikationen 2021

  • Ahlhelm M, Latorre S H, Mayr H O, Storch C, Freytag C, Werner D, Schwarzer-Fischer E, Seidenstücker M. Mechanically stable β-TCP structural hybrid scaffolds for potential bone replacement. J. Compos. Sci. 5 (2021), 10, 281. doi: 10.3390/jcs5100281
  • Allelein S, Medina-Perez P, Heitor Lopes A L, Rau S, Hause G, Kölsch A, Kuhlmeier D. Potential and challenges of specifically isolating extracellular vesicles from heterogeneous populations. Sci Rep. (2021) , 11, 11585. doi: 10.1038/s41598-021-91129-y
  • Anywar G, Kakudidi E, Byamukama R, Mukonzo J, Schubert A, Oryem-Origa H, Jassoy C. A review of the toxicity and phytochemistry of Medicinal plant species used by herbalists in treating people living with HIV/AIDS in Uganda. Front Pharmacol. (2021), 12, 615147. doi: 10.3389/fphar.2021.615147
  • Bauer M, Vaxevanis C, Al-Ali H K, Jaekel N, Le Hoa Naumann C, Schaffrath J, Rau A, Seliger B, Wickenhauser C. Altered spatial composition of the immune cell repertoire in association to CD34+ blasts in myelodysplastic syndromes and secondary acute myeloid leukemia. Cancers (Basel).13 (2021), 2, 186. doi: 10.3390/cancers13020186
  • Berneck BS, Rockstroh A, Barzon L, Sinigaglia A, Vocale C, Landini MP, Rabenau HF, Schmidt-Chanasit J, Ulbert S. Serological differentiation of West Nile virus- and Usutu virus-induced antibodies by envelope proteins with modified cross-reactive epitopes. Transbound Emerg Dis. (2021) Dec 16. doi: 10.1111/tbed.14429
  • Berto C, Krajcarz M T, Hoyo M, Komar M, Sinet-Mathiot V, Zarzecka-Szubinska K, Krajcarz M, Szymanek M, Wertz K, Marciszak A, Metrak M, Suska-Malawska M, Wilcke A, Kot M. Environment changes during middle to upper palaeolithic transition in southern Poland (Central Europe) : a multiproxy approach for the MIS 3 sequence of Koziarnia Cave (Kraków-Częstochowa Upland). Journal of archaeological science reports 35 (2021), 102723. doi: 10.1016/j.jasrep.2020.102723
  • Bialek-Waldmann JK, Domning S, Esser R, Glienke W, Mertens M, Aleksandrova K, Arseniev L, Kumar S, Schneider A, Koenig J, Theobald SJ, Tsay HC, Cornelius ADA, Bonifacius A, Eiz-Vesper B, Figueiredo C, Schaudien D, Talbot SR, Bleich A, Spineli LM, von Kaisenberg C, Clark C, Blasczyk R, Heuser M, Ganser A, Köhl U, Farzaneh F, Stripecke R. Induced dendritic cells co-expressing GM-CSF/IFN-α/tWT1 priming T and B cells and automated manufacturing to boost GvL. Mol Ther Methods Clin Dev. (2021) 21, Seite 621-641. doi: 10.1016/j.omtm.2021.04.004
  • Binder S, Zipfel I, Müller C, Wiedemann K, Schimmelpfennig C, Pfeifer G, Reiche K, Hauschildt S, Lehmann J, Köhl U, Horn F, Friedrich M. The noncoding RNA LINC00152 conveys contradicting effects in different glioblastoma cells. Sci Rep. (2021), 11, 18499. doi: 10.1038/s41598-021-97533-8
  • Bitar M, Boettcher M, Boldt A, Hauck F, Köhl U, Liebert UG, Magg T, Schulz MS, Sack U. Flow cytometric measurement of STAT5 phosphorylation in cytomegalovirus-stimulated T cells. Cytometry A. 99 (2021), 8, Seite 774-783. doi: 10.1002/cyto.a.24286
  • Blache U, Weiss R, Boldt A, Kapinsky M, Blaudszun AR, Quaiser A, Pohl A, Miloud T, Burgaud M, Vucinic V, Platzbecker U, Sack U, Fricke S, Koehl U. Advanced flow cytometry assays for immune monitoring of CAR-T cell applications. Front Immunol. (2021), 12, 658314. doi: 10.3389/fimmu.2021.658314
  • Blaess M, Kaiser L, Sommerfeld O, Csuk R, Deigner H-P. Drugs, metabolites, and lung accumulating small lysosomotropic molecules: multiple targeting impedes SARS-CoV-2 infection and progress to COVID-19. Int J Mol Sci. 22 (2021), 4, 1797. doi: 10.3390/ijms22041797
  • Bluhm A, Schrempel S, Hörsten S, Schulze A, Roßner S. Proteolytic α-synuclein cleavage in health and disease. Int J Mol Sci. 22, (2021), 11, 5450. doi: 10.3390/ijms22115450
  • Breitrück A, Weigel M, Hofrichter J, Sempert K, Kerkhoff C, Mohebali N, Mitzner S, Hain T, Kreikemeyer B. Smectite as a preventive oral treatment to reduce clinical symptoms of DSS induced colitis in Balb/c mice. Int J Mol Sci. 22 (2021), 16, 8699. doi: 10.3390/ijms22168699
  • Büning H, Fehse B, Ivics Z, Kochanek S, Koehl U, Kupatt C, Mussolino C, Nettelbeck DM, Schambach A, Uckert W, Wagner E, Cathomen T. Gene therapy "Made in Germany": a historical perspective, analysis of the status quo, and recommendations for action by the German Society for Gene Therapy. Hum Gene Ther. 32 (2021), 19-20, Seite 987-996. doi: 10.1089/hum.2021.29178.hbu
  • de Maat S, Clark C, Barendrecht AD, Smits S, van Kleef ND, El Otmani H, Waning M, van Moorsel MVA, Szardenings M, Delaroque N, Vercruysse K, Urbanus RT, Sebastian S, Lenting PJ, Hagemeyer CE, Renné T, Vanhoorelbeke K, Tersteeg C, Maas C. Microlyse: a thrombolytic agent that targets VWF for clearance of microvascular thrombosis. Blood (2021), Nov 9. doi: 10.1182/blood.2021011776
  • Dekker J, Sinet-Mathiot V, Spithoven M, Smit B, Wilcke A, Welker F, Verpoorte A, Soressi M. Human and cervid osseous materials used for barbed point manufacture in Mesolithic Doggerland. Journal of archaeological science reports 35 (2021), 102678, 9 Seiten. doi: 10.1016/j.jasrep.2020.102678
  • Dorner J, Korn P, Gruhle K, Ramsbeck D, Garamus VM, Lilie H, Meister A, Schwieger C, Ihling C, Sinz A, Drescher S. A diazirine-modified membrane lipid to study peptide/lipid interactions - chances and challenges. Chemistry. 27 (2021), 59, Seite 14586-14593. doi: 10.1002/chem.202102048
  • Elbalasy I, Mollenkopf P, Tutmarc C, Herrmann H, Schnauß J. Keratins determine network stress responsiveness in reconstituted actin-keratin filament systems. Soft Matter. 17 (2021), 14, Seite 3954-3962. doi: 10.1039/d0sm02261f
  • Engel K, Wieland L, Krüger A, Volkmer I, Cynis H, Emmer A, Staege MS. Identification of differentially expressed human endogenous retrovirus families in human leukemia and lymphoma cell lines and stem cells. Front Oncol. (2021), 11, 637981. doi: 10.3389/fonc.2021.637981
  • Evert K, Kocher T, Schindler A, Müller M, Müller K, Pink C, Holtfreter B, Schmidt A, Dombrowksi F, Schubert A, Woedtke T, Rupf S, Calvisi D F, Bekeschuss S, Jablonowski L. Repeated exposure of the oral mucosa over 12 months with cold plasma is not carcinogenic in mice. Sci Rep. (2021), 11, 1, 20672. doi: 10.1038/s41598-021-99924-3
  • Galbraith D, Loureiro J, Antoniadi I, Bainard J,Bures P, Cápal P, Castro M, Castro S, Certner M, Certnerova D, Chumova Z, Dolezel J, Giorgi D, Husband B C, Kolár F, Koutecký P, Kron P, Leitch I J, Ljung K, Lopes S, Lucanova M, Lucretti S, Ma W, Melzer S, Molnár I, Novák O, Poulton N, Skalický V, Sliwinska E, Smarda P, Smith T W, Sun G, Talhinhas P, Tárnok A, Temsch E M, Trávnícek P, Urfus T. Best practices in plant cytometry. Cytometry A. 99 (2021), 4, Seite 311-317. doi: 10.1002/cyto.a.24295
  • Gege C, Bravo F J.; Uhlig N, Hagmaier T, Schmachtenberg R, Elis J, Burger-Kentischer A, Finkelmeier D, Hamprecht K, Grunwald T, Bernstein D I, Kleymann G. A helicase-primase drug candidate with sufficient target tissue exposure affects latent neural herpes simplex virus infections. Sci Transl Med. 13 (2021), 598, eabf8668. doi: 10.1126/scitranslmed.abf8668
  • Glaser M, Deb S, Seier F, Agrawal A, Liedl T, Douglas S, Gupta M K, Smith DM. The art of designing DNA nanostructures with CAD software. Molecules. 26 (2021), 8, 2287. doi: 10.3390/molecules26082287
  • Gragoll I, Schumann L, Neubauer M, Westphal C, Lang H. Healthcare avoidance: a qualitative study of dental care avoidance in Germany in terms of emergent behaviours and characteristics. BMC Oral Health. 21 (2021), 1, 563. doi: 10.1186/s12903-021-01933-1
  • Gröger V, Emmer A, Staege MS, Cynis H. Endogenous retroviruses in nervous system disorders. Pharmaceuticals (Basel) 14 (2021), 1, 70. doi: 10.3390/ph14010070
  • Häfner L, Kalkhof S, Jira W. Authentication of nine poultry species using high-performance liquid chromatography–tandem mass spectrometry. Food control 122 (2021), 10780. doi: 10.1016/j.foodcont.2020.107803
  • Hansen M, Stahl L, Heider A, Hilger N, Sack U, Kirschner A, Cross M, Fricke S. Reduction of graft-versus-host-disease in NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ (NSG) mice by cotransplantation of syngeneic human umbilical cord-derived mesenchymal stromal cells. Transplant Cell Ther. 27 (2021), 8, 658, e1-658.e10. doi: 10.1016/j.jtct.2021.04.018
  • Haq Z, Itani M I, Zhang L, Dinary F, Farha J, Abbarh S, Akshintala V, Koller K, Jovani M, Hedjoudje A, Ngamruengphong S, Oberbach A, Badurdeen D, Kumbhari V. The utility of EndoFLIP for measuring gastrojejunal anastomosis diameter and distensibility in patients experiencing weight regain post Roux-en-Y gastric bypass. Obes Surg. (2021), 7, Seite 3353-3359. doi: 10.1007/s11695-021-05302-3
  • Hartlage-Rübsamen M, Bluhm A, Moceri S, Machner L, Köppen J, Schenk M, Hilbrich I, Holzer M, Weidenfeller M, Richter F, Coras R, Serrano G E , Beach T G , Schilling S, von Hörsten S, Xiang W, Schulze A, Roßner S. A glutaminyl cyclase-catalyzed α-synuclein modification identified in human synucleinopathies. Acta neuropathologica (2021), 142 (3), S. 399–421. doi: 10.1007/s00401-021-02349-5
  • Häusner S, Herbst L, Bittorf P, Schwarz T, Henze C, Mauermann M, Ochs J, Schmitt R, Blache U, Wixmerten A, Miot S, Martin I, Pullig O. From single batch to mass-production-automated platform design concept for a phase II clinical trial tissue engineered cartilage product. Front Med (Lausanne). (2021), 8, 712917. doi: 10.3389/fmed.2021.712917
  • Hoen L, Pfeffer D, Zapf R, Raabe A, Hildebrand J, Kraft J, Kalkhof S. Association of drug application and hydration status in elderly patients. Nutrients. 13 (2021), 6, 1929. doi: 10.3390/nu13061929
  • Hoffmann T, Rahfeld J-U, Schenk M, Ponath F, Makioka K, Hutter-Paier B, Lues I, Lemere C, Schilling S. Combination of the glutaminyl cyclase inhibitor PQ912 (Varoglutamstat) and the murine monoclonal antibody PBD-C06 (m6) shows additive effects on brain Aβ pathology in transgenic mice. Int J Mol Sci. 22 (2021), 21, 11791. doi: 10.3390/ijms222111791
  • Hoyer S, Eberlein V, Schuler G, Berking C, Heinzerling L, Schaft N, Dörrie J. BRAF and MEK inhibitors affect dendritic-cell maturation and t-cell stimulation. Int J Mol Sci. 22 (2021), 21, 11951. doi: 10.3390/ijms222111951
  • Huber R, Augsten S, Kirsten H, Zell R, Stelzner A, Thude H, Eidner T, Stuhlmüller B, Ahnert P, Kinne RW. Identification of new, functionally relevant mutations in the coding regions of the human fos and jun proto-oncogenes in rheumatoid arthritis synovial tissue. Life 11 (2021), 5. doi: 10.3390/life11010005
  • Kitte R, Tretbar M, Dluczek S, Beckmann L, Marquardt P, Duenkel A, Schubert A, Fricke S, Tretbar US. Chemical and cytotoxic activity of three main sesquiterpenoids from Warburgia ugandensis. Results in Chemistry (2021), 3, 100242. doi: 10.1016/j.rechem.2021.100242
  • Koball S, Westphal C, Frimmel S, Hinz M, Klammt S, Mitzner S. Comparison of changes in albumin binding capacity during hemodiafiltration or hemodialysis with middle cut off membranes. Int J Artif Organs 44 (2021), 5, Seite 297-301. doi: 10.1177/0391398820961780
  • Köhl U, Abken H. CAR T cells as drugs for novel therapies (advanced therapy medicinal products). Internist 62 (2021), 4 Seite 449-457. doi: 10.1007/s00108-021-00953-x
  • Koliopoulos P, Kayange N M, Daniel T, Huth F, Gröndahl B, Medina-Montaño G C, Pretsch L, Klüber J, Schmidt C, Züchner A, Ulbert S, Mshana S E, Addo M, Gehring S. Multiplex-RT-PCR-ELISA panel for detecting mosquito-borne pathogens: plasmodium sp. preserved and eluted from dried blood spots on sample cards. Malar J. 20 (2021), 1, 66. doi: 10.1186/s12936-021-03595-4
  • Körner S, Makert GR, Ulbert S, Pfeffer M, Mertens-Scholz K. The prevalence of Coxiella burnetii in hard ticks in Europe and their role in Q fever transmission revisited - a systematic review. Front Vet Sci. (2021), 8:655715. doi: 10.3389/fvets.2021.655715
  • Körtge A, Majcher-Peszynska J, Heskamp B, Wasserkort R, Mitzner S. Antibiotics removal by continuous venovenous hemofiltration with a novel asymmetric triacetate membrane hemofilter: an in vitro study. Blood Purif. 50 (2021), 6, Seite 899-905. doi: 10.1159/000513417
  • Krüsemann H, Töllner P, Westphal E, Hofrichter J, Seitz H. Design and 3D printing of miniaturized dialyzers for laboratory use. Transactions AMM 3 (2021), 1, 545. doi: 10.18416/AMMM.2021.2109545
  • Kürzel S, Blaudszun A-R, Stahl L, Herbst R, Krochinsky F, Birkmann J, Hänel A, Schäfer-Eckart K, Ehninger G, Fiedler F, Bornhäuser M , Fricke S, Hänel M. Dexa-BEAM versus MIFAP as salvage regimen for recurrent lymphoma: a prospective randomized multicenter phase II trial with a median follow-up of 14.4 years. J Cancer Res Clin Oncol. (2021), doi: 10.1007/s00432-021-03702-7
  • Langerak T, Kasbergen LMR, Chandler F, Brinkman T, Faerber Z, Phalai K, Ulbert S, Rockstroh A, Bruin E de, Koopmans MPG, Rockx B, Gorp ECM van, E, Vreden S. Zika virus antibody titers three years after confirmed infection. Viruses (2021), 13, 7, 1345. doi: 10.3390/v13071345
  • Lapuente D, Fuchs J, Willar J, Antão AV, Eberlein V, Uhlig N, Issmail L, Schmidt A, Oltmanns F, Peter AS,Mueller-Schmucker S, Irrgang P, Fraedrich K, Cara A, Hoffmann M, Pöhlmann S, Ensser A, Pertl C, Willert T, Thirion C, Grunwald T, Überla K, Tenbusch M. Protective mucosal immunity against SARS-CoV-2 after heterologous systemic prime-mucosal boost immunization. Nat Commun. (2021), 12, 1, 6871. doi: 10.1038/s41467-021-27063-4
  • Laube M, Pietsch S, Pannicke T, Thome UH, Fabian C. Development and functional characterization of fetal lung organoids. Front Med (Lausanne) (2021), 8, 678438. doi: 10.3389/fmed.2021.678438
  • Lidzba N, Arteaga V G, Schiermeyer A, Havenith H, Muranyi I, Schillberg S, Lehmann J, Ueberham E. Development of monoclonal antibodies against pea globulins for multiplex assays targeting legume proteins. J Agric Food Chem. 69 (2021), 9, Seite 2864-2874. doi: 10.1021/acs.jafc.0c07177
  • Linnert M, Fritz C, Jäger C, Schlenzig D, Ramsbeck D, Kleinschmidt M, Wermann M, Demuth HU, Parthier C, Schilling S. Structure and dynamics of Meprin β in complex with a hydroxamate-based inhibitor. Int J Mol Sci. 22 (2021), 11, 5651. doi: 10.3390/ijms22115651
  • Mahmoud M, Ruppert C, Rentschler S, Laufer S, Deigner H-P. Combining aptamers and antibodies: lateral flow quantification for thrombin and interleukin-6 with smartphone readout. Sensors and actuators. B, chemical 333 (2021), 129246. doi: 10.1016/j.snb.2020.129246
  • Meir A Y, Keller M, Bernhart S H, Rinott E, Tsaban G, Zelicha H, Kaplan A, Schwarzfuchs D, Shelef I, Gepner Y, Li Y, Lin Y, Blüher M, Ceglarek U, Stumvoll M, Stadler P F, Stampfer M J, Kovacs P, Liang L , Shai I. Lifestyle weight-loss intervention may attenuate methylation aging: the CENTRAL MRI randomized controlled trial. Clin Epigenetics 13 (2021), 1, 48. doi: 10.1186/s13148-021-01038-0
  • Meir A Y, Keller M, Müller L, Bernhart S H, Tsaban G, Zelicha H, Rinott E, Kaplan A, Gepner Y, Shelef I, Schwarzfuchs D, Ceglarek U, Stadler P F, Blüher M, Stumvoll M, Kovacs P, Shai I. Effects of lifestyle interventions on epigenetic signatures of liver fat: Central randomized controlled trial. Liver Int. 41 (2021), 9, Seite 2101-2111. doi: 10.1111/liv.14916
  • Meyer S, Handke D, Mueller A, Biehl K, Kreuz M, Bukur J, Koehl U, Lazaridou MF, Berneburg M, Steven A, Massa C, Seliger B. Distinct molecular mechanisms of altered HLA class II expression in malignant melanoma. Cancers (Basel). 2021 Aug 3;13(15):3907. doi: 10.3390/cancers13153907
  • Müller-Deile J, Sarau G, Kotb AM, Jaremenko C, Rolle-Kampczyk UE, Daniel C, Kalkhof S, Christiansen SH, Schiffer M. Novel diagnostic and therapeutic techniques reveal changed metabolic profiles in recurrent focal segmental glomerulosclerosis. Sci Rep. 2021 Feb 25;11(1):4577. doi: 10.1038/s41598-021-83883-w
  • Oliveira-Filho EF, Fischer C, Berneck BS, Carneiro IO, Kühne A, Almeida Campos A C, Ribas J R L, Netto EM, Franke CR, Ulbert S, Drexler JF. Ecologic determinants of West Nile virus seroprevalence among equids, Brazil. Emerg Infect Dis. 27 (2021), 9, Seite 2466-2470. doi: 10.3201/eid2709.204706
  • Peter AS, Roth E, Schulz SR, Fraedrich K, Steinmetz T, Damm D, Hauke M, Richel E, Mueller-Schmucker S, Habenicht K, Eberlein V, Issmail L, Uhlig N, Dolles S, Grüner E, Peterhoff D, Ciesek S, Hoffmann M, Pöhlmann S, McKay PF, Shattock RJ, Wölfel R, Socher E, Wagner R, Eichler J, Sticht H, Schuh W, Neipel F, Ensser A, Mielenz D, Tenbusch M, Winkler TH, Grunwald T, Überla K, Jäck H-M. A pair of noncompeting neutralizing human monoclonal antibodies protecting from disease in a SARS-CoV-2 infection model. Eur J Immunol. (2021), Aug 6. doi: 10.1002/eji.202149374
  • Ramsbeck D, Taudte N, Jänckel N, Strich S, Rahfeld J-U, Buchholz M. Tetrahydroimidazo[4,5-c]pyridine-based inhibitors of Porphyromonas gingivalis glutaminyl cyclase. Pharmaceuticals 14 (2021), 12, 1206. doi: 10.3390/ph14121206
  • Reiß F, Kiefer N, Noll M, Kalkhof S. Application, release, ecotoxicological assessment of biocide in building materials and its soil microbial response. Ecotoxicol Environ Saf. (2021), 224, 112707. doi: 10.1016/j.ecoenv.2021.112707
  • Reschke R, Gussek P, Boldt A, Sack U, Köhl U, Lordick F, Gora T, Kreuz M, Reiche K, Simon JC, Ziemer M, Kunz M. Distinct immune signatures indicative of treatment response and immune-related adverse events in melanoma patients under immune checkpoint inhibitor therapy. Int J Mol Sci. 22 (2021), 15, 8017. doi: 10.3390/ijms22158017
  • Riemschneider S, Hoffmann M, Slanina U, Weber K, Hauschildt S, Lehmann J. Indol-3-carbinol and quercetin ameliorate chronic dss-induced colitis in c57bl/6 mice by ahr-mediated anti-inflammatory mechanisms. Int J Environ Res Public Health 18 (2021), 5, 2262. doi: 10.3390/ijerph18052262
  • Rockstroh A, Wolf J, Fertey J, Kalbitz S, Schroth S, Lübbert C, Ulbert S, Borte S. Correlation of humoral immune responses to different SARS-CoV-2 antigens with virus neutralizing antibodies and symptomatic severity in a German COVID-19 cohort. Emerg Microbes Infect. 10 (2021),1, Seite 774-781. doi: 10.1080/22221751.2021.1913973
  • Röder M, Wiacek C, Lankamp F, Kreyer J, Weber W, Ueberham E. Improved sensitivity of allergen detection by immunoaffinity LC-MS/MS using ovalbumin as a case study. Foods 10 (2021), 12, 2932. doi: 10.3390/foods10122932
  • Sack U, Fricke S. Can flow cytometry outperform genetic testing in eosinophilia patients? Cytometry A 99 (2021), 8 Seite 772-773. doi: 10.1002/cyto.a.24311
  • Saha S, Allelein S, Pandey R, Medina-Perez P, Osman E, Kuhlmeier D, Soleymani L. Two-step competitive hybridization assay: a method for analyzing cancer-related microRNA embedded in extracellular vesicles. Anal Chem. 93 (2021), 48, Seite 15913-15921. doi: 10.1021/acs.analchem.1c03165
  • Schaffert A, Krieg L, Weiner J, Schlichting R, Ueberham E, Karkossa I, Bauer M, Landgraf K, Junge K M, Wabitsch M, Lehmann J, Escher B I, Zenclussen A C, Körner A, Blüher M, Heiker J T, Bergen M, Schubert K. Alternatives for the worse: molecular insights into adverse effects of bisphenol a and substitutes during human adipocyte differentiation. Environ Int. (2021), 156:106730. doi: 10.1016/j.envint.2021.106730
  • Schätzl T, Kaiser L, Deigner H-P. Facioscapulohumeral muscular dystrophy: genetics, gene activation and downstream signalling with regard to recent therapeutic approaches: an update. Orphanet J Rare Dis. 16 (2021), 1, 129. doi: 10.1186/s13023-021-01760-1
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Publikationen 2020

  • Anywar G, Kakudidi E, Byamukama R, Mukonzo J, Schubert A, Oryem-Origa H. Data on medicinal plants used by herbalists for boosting immunity in people living with HIV/AIDS in Uganda. Data in Brief 29 (2020) Artikel-Nr.: 105097, 4 Seiten. dx.doi.org/10.1016/j.dib.2019.105097
  • Anywar G, Kakudidi E, Byamukama R, Mukonzo J, Schubert A, Oryem-Origa H. Medicinal plants used by traditional medicine practitioners to boost the immune system in people living with HIV/AIDS in Uganda. European journal of integrative medicine 35 (2020) article 101011. dx.doi.org/10.1016/j.eujim.2019.101011
  • Ayobahan SU, Eilebrecht S, Baumann L, Teigeler M, Hollert H, Kalkhof S, Eilebrecht E, Schäfers C. Detection of biomarkers to differentiate endocrine disruption from hepatotoxicity in zebrafish (Danio rerio) using proteomics. Chemosphere 240 (2020), 124970. dx.doi.org/10.1016/j.chemosphere.2019.124970
  • Bauer BU, Runge M, Campe A, Henning KJ, Mertens-Scholz K, Boden K, Sobotta K, Frangoulidis D, Knittler MR, Matthiesen S, Berens C, Lührmann A, Fischer SF, Ulbert S, Makert GR, Ganter M. Coxiella burnetii: ein Übersichtsartikel mit Fokus auf das Infektions­geschehen in deutschen Schaf- und Ziegen­herden / a review focusing on infections in German sheep and goat flocks. Berliner und Münchener tierärztliche Wochenschrift 133 (2020) 3-4, Seite 184-200. dx.doi.org/10.2376/0005-9366-19030
  • Bedulina D, Drozdova P, Gurkov A, von Bergen M, Stadler PF, Luckenbach T, Timofeyev M, Kalkhof S. Proteomics reveals sex-specific heat shock response of Baikal amphipod Eulimnogammarus cyaneus. Science of The Total Environment (2020) Oct, 143008. dx.doi.org/10.1016/j.scitotenv.2020.143008
  • Berneck BS, Rockstroh A, Fertey J, Grunwald T, Ulbert S. A recombinant zika virus envelope protein with mutations in the conserved fusion loop leads to reduced antibody cross-reactivity upon vaccination. Vaccines 8 (2020) 4, Artikel-Nr.: 603, 10 Seiten. dx.doi.org/10.3390/vaccines8040603
  • Binder S, Zipfel I, Friedrich M, Riedel D, Ende S, Kämpf C, Wiedemann K, Buschmann T, Puppel SH, Reiche K, Stadler PF, Horn F. Master and servant: LINC00152 - a STAT3-induced long noncoding RNA regulates STAT3 in a positive feedback in human multiple myeloma. BMC medical genomics 13 (Februar 2020) Artikelnr.: 22, 13 Seiten. dx.doi.org/10.1186/s12920-020-0692-3
  • Bitar M, Boettcher M, Boldt A, Hauck F, Köhl U, Liebert UG, Magg T, Schulz MS, Sack U. Flow cytometric measurement of STAT5 phosphorylation in CMV stimulated T Cells. Cytometry A (2020), Dec 6. dx.doi.org/10.1002/cyto.a.24286
  • Bribiesca E, Braumann U-D, Carrillo-Bermejo A, Sossa-Azuela H. An approach to the computation of the Euler number by means of the vertex chain code. Computational and mathematical methods in medicine (2020),2020:5632159, dx.doi.org/10.1155/2020/5632159
  • Buniatian GH, Weiskirchen R, Weiss TS, Schwinghammer U, Fritz M, Seferyan T, Proksch B, Glaser M, Lourhmati A, Buadze M, Borkham-Kamphorst E, Gaunitz F, Gleiter CH, Lang T, Schaeffeler E, Tremmel R, Cynis H, Frey WH II, Gebhardt R, Friedmann SL, Mikulits W, Schwab M, Danielyan L. Antifibrotic effects of amyloid-beta and its loss in cirrhotic liver. Cells 9 (2020) 2, 22 Seiten. dx.doi.org/10.3390/cells9020452
  • Chauhan SKS, Koehl U, Kloess S. Harnessing NK Cell Checkpoint-Modulating Immunotherapies. Cancers 12 (2020), article number:1807. dx.doi.org/10.3390/cancers12071807
  • Cohnen J, Kornstädt L, Hahnefeld L, Ferreiros N, Pierre S, Koehl U, Deller T, Geisslinger G, Scholich K. Tumors Provoke Inflammation and Perineural Microlesions at Adjacent Peripheral Nerves. Cells 9 (2020), 2:320. dx.doi.org/10.3390/cells9020320
  • Crehan H, Liu B, Kleinschmidt M, Rahfeld J-U, Le KX, Caldarone BJ, Frost JL, Hettmann T, Hutter-Paier B, O'Nuallain B, Park M-A, DiCarli MF, Lues I, Schilling S, Lemere CA. Effector function of anti-pyroglutamate-3 Aβ antibodies affects cognitive benefit, glial activation and amyloid clearance in Alzheimer's like mice. Alzheimer's research & therapy 12 (2020) Artikelnr.: 12 (2020), 19 Seiten. dx.doi.org/10.1186/s13195-019-0579-8
  • Derrick T, Sandetskaya N, Pickering H, Kölsch A, Ramadhani A, Mafuru E, Massae P, Malisa A, Mtuy T, Burton MJ, Holland MJ, Kuhlmeier D. DjinniChip: evaluation of a novel molecular rapid diagnostic device for the detection of Chlamydia trachomatis in trachoma-endemic areas. Parasites & vectors 13 (2020) Artikel-Nr.: 533, 10 Seiten. dx.doi.org/10.1186/s13071-020-04414-6
  • Dudaie M, Nissim N, Barnea I, Gerling T, Duschl C, Kirschbaum M, Shaked NT. Label-free discrimination and selection of cancer cells from blood during flow using holography-induced dielectrophoresis. J. Biophotonics. 2020;13:e202000151. dx.doi.org/10.1002/jbio.202000151
  • Fertey J, Bayer L, Kähl S, Haji RM, Burger-Kentischer A, Thoma M, Standfest B, Schönfelder J, Portillo Casado J, Rögner FH, Baums CG, Grunwald T, Ulbert S. Low-Energy Electron Irradiation Efficiently Inactivates the Gram-Negative Pathogen Rodentibacter pneumotropicus-A New Method for the Generation of Bacterial Vaccines with Increased Efficacy. Vaccines (Basel). 2020 Mar 2;8(1):113. dx.doi.org/10.3390/vaccines8010113
  • Fertey J, Thoma M, Beckmann J, Finkensieper J, Reißhauer S, Berneck BS, Issmail L, Schönfelder J, Casado JP, Poremba A, Rögner F-H, Standfest B, Makert GR, Walcher L, Kistenmacher A-K, Fricke S, Grunwald T, Ulbert S, Bayer L. Automated application of low energy electron irradiation enables inactivation of pathogen- and cell-containing liquids in biomedical research and production facilities. Scientific reports 10 (2020) 1, Artikel-Nr.: 12786, 14 Seiten. dx.doi.org/10.1038/s41598-020-69347-7
  • Friedrich M, Wiedemann K, Reiche K, Puppel SH, Pfeifer G, Zipfel I, Binder S, Koehl U, Mueller GA, Engeland K, Aigner A, Füssel, S, Fröhner M, Peitzsch C, Dubrovska A, Rade M, Christ S, Schreiber S, Hackermüller J, Lehmann J, Toma MI, Muders MH, Sommer U, Baretton GB, Wirth MP, Horn F. The role of lncRNAs TAPIR-1 and-2 as diagnostic markers and potential therapeutic targets in prostate cancer. Cancers 12 (Mai 2020) 5, 1122, 27 Seiten. dx.doi.org/10.3390/cancers12051122
  • Gehre C, Flechner M, Kammerer S, Küpper JH, Coleman CD, Püschel GP, Uhlig K, Duschl C. Real time monitoring of oxygen uptake of hepatocytes in a microreactor using optical microsensors. Scientific Reports 10 (2020), 1:13700. dx.doi.org/10.1038/s41598-020-70785-6
  • Gnoth K, Piechotta A, Kleinschmidt M, Konrath S, Schenk M, Taudte N, Ramsbeck D, Nykiel V, Geißler S, Eichentopf R, Barendrecht S, Hartlage-Rübsamen M, Demuth H-U, Roßner S, Cynis H, Rahfeld J-U, Schilling S. Targeting isoaspartate-modified Aβ rescues behavioral deficits in transgenic mice with Alzheimer’s disease-like pathology. Alzheimer's research & therapy 12 (2020) Artikel-Nr.: 149, 20 Seiten. dx.doi.org/10.1186/s13195-020-00719-x
  • Gröger V, Wieland L, Naumann M, Meinecke A-C, Meinhardt B, Roßner S, Ihling C, Emmer A, Staege MS, Cynis H. Formation of herv-k and herv-fc1 envelope family members is suppressed on transcriptional and translational level. International journal of molecular sciences 21 (2020) 21, Artikel-Nr.: 7855, 23 Seiten. dx.doi.org/10.3390/ijms21217855
  • Hahn MB, Smales GJ, Seitz H, Solomun T, Sturm H. Interaction with DNA: Influence on Ultraviolet Radiation Damage. Phys Chem Chem Phys 2020; Vol. 22(13): 6984-6992. dx.doi.org/10.1039/d0cp00092b
  • Heilig CE, Badoglio M, Labopin M, Fröhling S, Secondino S, Heinz J, Nicolas-Virelizier E, Blaise D, Korenbaum C, Santoro A, Verbeek M, Krüger W, Siena S, Passweg JR, Di Nicola M, Rifón J, Dreger P, Koehl U, Chabannon C, Pedrazzoli P. Haematopoietic stem cell transplantation in adult soft-tissue sarcoma: an analysis from the European Society for Blood and Marrow Transplantation. ESMO Open. 2020 Oct;5(5):e000860. dx.doi.org/10.1136/esmoopen-2020-000860
  • Hettmann T, Gillies SD, Kleinschmidt M, Piechotta A, Makioka K, Lemere CA, Schilling S, Rahfeld J-U, Lues I. Development of the clinical candidate PBD-C06, a humanized pGlu3-Aβ-specifc antibody against Alzheimer's disease with reduced complement activation. Scientific reports 10 (2020) Artikel-Nr.: 3294, 13 Seiten. dx.doi.org/10.1038/s41598-020-60319-5
  • Hsu MJ, Karkossa I, Schäfer I, Christ M, Kühne H, Schubert K, Rolle-Kampczyk UE, Kalkhof S, Nickel S, Seibel P, von Bergen M, Christ B. Mitochondrial Transfer by Human Mesenchymal Stromal Cells Ameliorates Hepatocyte Lipid Load in a Mouse Model of NASH. Biomedicines 8 (2020), 9, :350. dx.doi.org/10.3390/biomedicines8090350
  • Jansig E, Geissler S, Rieckmann V, Kuenemund A, Hietel B, Schenk M, Wussow S, Kreideweiss P, Panzner S, Reinsch C, Cynis H. Viromers as carriers for mRNA-mediated expression of therapeutic molecules under inflammatory conditions. Scientific Reports 10 (2020), article number: 15090. dx.doi.org/10.1038/s41598-020-72004-8
  • Jnana A, Muthuraman V, Varghese VK, Chakrabarty S, Murali TS, Ramachandra L, Shenoy KR, Rodrigues GS, Prasad SS, Dendukuri D, Morschhauser A, Nestler J, Peter H, Bier FF, Satyamoorthy K. Microbial Community Distribution and Core Microbiome in Successive Wound Grades of Individuals with Diabetic Foot Ulcers. Appl Environ Microbiol. 2020 Mar 2;86(6):e02608-19. dx.doi.org/10.1128/AEM.02608-19
  • Kähl S, Volke D, Fornefett J, Fingas F, Klose K, Benga L, Grunwald T, Ulrich R, Hoffmann R, Baums CG. Identification of a large repetitive RTX immunogen in a highly virulent Rodentibacter heylii strain. Microbes and Infection 23 (2020), S1286-4579(20)30185-4. dx.doi.org/10.1016/j.micinf.2020.10.007
  • Kalkhof S, Krieg L, Büttner P, Wabitsch M, Küntzel C, Friebe D, Landgraf K, Hanschkow M, Schubert K, Kiess W, Krohn K, Blüher M, von Bergen M, Körner A. In Depth Quantitative Proteomic and Transcriptomic Characterization of Human Adipocyte Differentiation Using the SGBS Cell Line. Proteomics (2020), May, e1900405. dx.doi.org/10.1002/pmic.201900405
  • Keller M, Meir AY, Bernhart SH, Gepner Y, Shelef I, Schwarzfuß D, Tsaban G, Zelicha H, Hopp L, Müller L, Rohde K, Böttcher Y, Stadler PF, Stumvoll M, Blüher M, Kovacs P, Shai I. DNA methylation signature in blood mirrors successful weight-loss during lifestyle interventions: the CENTRAL trial. Genome medicine 12 (2020) 1, Artikel-Nr.: 97, 18 Seiten. dx.doi.org/10.1186/s13073-020-00794-7
  • Kirchberg M, Eick S, Buchholz M, Rosche F, Kiesow A, Sarembe S, Mäder K. Controlled release minocycline-lipid-complex extrudates for the therapy of periodontitis with enhanced flexibility. International journal of pharmaceutics 568 (2020) Artikel-Nr.: 119578. dx.doi.org/10.1016/j.ijpharm.2020.119578
  • Klöß S, Dehmel S, Braun A, Parnham MJ, Köhl U, Schiffmann S. From Cancer to Immune-Mediated Diseases and Tolerance Induction: Lessons Learned From Immune Oncology and Classical Anti-cancer Treatment. Frontiers of Immunology (2020), 11:1423. dx.doi.org/10.3389/fimmu.2020.01423. eCollection 2020
  • Köppen J, Schulze A, Machner L, Wermann M, Eichentopf R, Guthardt M, Hähnel A, Klehm J, Kriegeskorte M-C, Hartlage-Rübsamen M, Morawski M, Hörsten S von, Demuth H-U, Roßner S, Schilling S. Amyloid-beta peptides trigger aggregation of alpha-synuclein in vitro. Molecules Volume 25 (2020) Issue 3, 18 Seiten. dx.doi.org/10.3390/molecules25030580
  • Körner S, Makert G, Mertens-Scholz K, Henning K, Pfeffer M, Starke A, Nijhof AM, Ulbert, S. Uptake and fecal excretion of coxiella burnetii by Ixodes ricinus and dermacentor marginatus ticks. Parasites & Vectors 13 (2020), 11 Seiten. dx.doi.org/10.1186/s13071-020-3956-z
  • Körschgen H, Jäger C, Tan K, Buchholz M, Stöcker W, Ramsbeck D. A Primary Evaluation of Potential Small-Molecule Inhibitors of the Astacin Metalloproteinase Ovastacin, a Novel Drug Target in Female Infertility Treatment. ChemMedChem 15 (2020), 16, 1499-1504. dx.doi.org/10.1002/cmdc.202000397
  • Kreuz M, Otto DJ, Fuessel S, Blumert C, Bertram C, Bartsch S, Loeffler D, Puppel SH, Rade M, Buschmann T, Christ S, Erdmann K, Friedrich M, Froehner M, Muders MH, Schreiber S, Specht M, Toma MI, Benigni F, Freschi M, Gandaglia G, Briganti A, Baretton GB, Loeffler M, Hackermüller J, Reiche K, Wirth M, Horn F. ProstaTrend-A Multivariable Prognostic RNA Expression Score for Aggressive Prostate Cancer. European Urology 78 (2020), 3, Seite 452-459. dx.doi.org/10.1016/j.eururo.2020.06.001
  • Kupski O, Funk L-M, Sautner V, Seifert F, Worbs B, Ramsbeck D, Meyer F, Diederichsen U, Buchholz M, Schilling S, Demuth H-U, Tittmann K. Hydrazides are potent transition-state analogues for glutaminyl cyclase implicated in the pathogenesis of Alzheimer's disease. Biochemistry 59 (2020) 28, Seite 2585-2591. dx.doi.org/10.1021/acs.biochem.0c00337
  • Kutovyi Y, Hlukhova H, Boichuk N, Menger M, Offenhäusser A, Vitusevich S. Amyloid-beta peptide detection via aptamer-functionalized nanowire sensors exploiting single-trap phenomena. Biosens Bioelectron. 2020;154:112053. dx.doi.org/10.1016/j.bios.2020.112053
  • Kutovyi Y, Li J, Zadorozhnyi I, Hlukhova H, Boichuk N, Yehorov D, Menger M, Vitusevich S. Highly Sensitive and Fast Detection of C-Reactive Protein and Troponin Biomarkers Using Liquidgated Single Silicon Nanowire Biosensors. MRS Advances 2020, 5(16), 835-846. dx.doi.org/10.1557/adv.2020.60
  • Kwesiga G, Kelling A, Kersting S, Sperlich E, von Nickisch-Rosenegk M, Schmidt B. Total Syntheses of Prenylated Isoflavones from Erythrina sacleuxii and Their Antibacterial Activity: 5-Deoxy-3'-prenylbiochanin A and Erysubin F. Journal of Natural Products 83 (2020), 11, Seite 3445-3453. dx.doi.org/10.1021/acs.jnatprod.0c00932
  • Laur N, Kinscherf R, Pomytkin K, Kaiser L, Knes O, Deigner HP. ICP-MS trace element analysis in serum and whole blood. PLoS ONE 15 (2020) 5, e0233357, 14 Seiten. dx.doi.org/10.1371/journal.pone.0233357
  • Leya T. The CCCryo Culture Collection of Cryophilic Algae as a valuable bioresource for algal biodiversity and for novel, industrially marketable metabolites. Applied Phycology 1 (2020), S1, S. 1-22. dx.doi.org/10.1080/26388081.2020.1753572
  • Marquardt P, Seide R, Vissiennon C, Schubert A, Birkemeyer C, Ahyi V, Fester K. Phytochemical characterization and in vitro anti-inflammatory, antioxidant and antimicrobial activity of Combretum Collinum Fresen leaves extracts from Benin. Molecules 25 (2020) 2, 18 Seiten. dx.doi.org/10.3390/molecules25020288
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  • Mohebali N, Ekat K, Kreikemeyer B, Breitrück A. Barrier Protection and Recovery Effects of Gut Commensal Bacteria on Differentiated Intestinal Epithelial Cells In Vitro. Nutrients (2020), 8, 2251. dx.doi.org/10.3390/nu12082251
  • Monasor LS, Müller SA, Colombo AV, Tanrioever G, König J, Roth S, Liesz A, Berghofer A, Piechotta A, Prestel M, Saito T, Saido TC, Herms J,Willem M, Haass C, Lichtenthaler SF, Tahirovic S. Fibrillar Aβ triggers microglial proteome alterations and dysfunction in Alzheimer mouse models. eLife 9 (2020) Artikel-Nr.: 54083, 33 Seiten. dx.doi.org/10.7554/eLife.54083
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  • Nasr W, Fabian C, Arnold K, Koehl U, Sack U, Weiss R, Cross M, Hauschildt S. Nicotinamide inhibits self-renewal and induces granulocyte differentiation of multipotent progenitor cells. Stem cell reviews and reports 16 (2020), Seite 1335-1342. dx.doi.org/10.1007/s12015-020-10019-4
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  • Omar MI, Roobol MJ, Ribal MJ, Abbott T, Agapow PM, Araujo S, Asiimwe A, Auffray C, Balaur I, Beyer K, Bernini C, Bjartell A, Briganti A, Butler-Ransohoff JE, Campi R, Cavelaars M, De Meulder B, Devecseri Z, Voss MD, Dimitropoulos K, Evans-Axelsson S, Franks B, Fullwood L, Horgan D, Smith EJ, Kiran A, Kivinummi K, Lambrecht M, Lancet D, Lindgren P, MacLennan S, MacLennan S, Nogueira MM, Moen F, Moinat M, Papineni K, Reich C, Reiche K, Rogiers S, Sartini C, van Bochove K, van Diggelen F, Van Hemelrijck M, Van Poppel H, Zong J, N'Dow J; PIONEER Consortium. Introducing PIONEER: a project to harness big data in prostate cancer research. Nature Reviews Urology 17 (2020), 6, Seite 351-362. dx.doi.org/10.1038/s41585-020-0324-x
  • Ramírez Caballero L, Kny C, Treudler R, Simon JC, Kern K, Jappe U, Szardenings M. Identification of seasonal variations of antibodies against PR-10-specific epitopes can be improved using peptide-phage display. International archives of allergy and immunology (2020) 7 Seiten. dx.doi.org/10.1159/000509995
  • Ramm F, Dondapati SK, Thoring L, Zemella A, Wüstenhagen DA, Frentzel H, Stech M, Kubick S. Mammalian cell-free protein expression promotes the functional characterization of the tripartite non-hemolytic enterotoxin from Bacillus cereus. Sci Rep 10, 2887 (2020). dx.doi.org/10.1038/s41598-020-59634-8
  • Rohde F, Braumann U-D, Schmidt M. Correlia: an ImageJ plug-in to co-register and visualise multimodal correlative micrographs. Journal of Microscopy (2020), 280(1):3–11, dx.doi.org/10.1111/jmi.12928
  • Ros S, Freitag JS, Smith DM, Stöver HDH. Charge-shifting polycations based on N, N-(dimethylamino)ethyl acrylate for improving cytocompatibility during DNA delivery. ACS omega 5 (April 2020) 16, Seite 9114-9122. dx.doi.org/10.1021/acsomega.9b03734
  • Saidu NEB, Bonini C, Dickinson A, Grce M, Inngjerdingen M, Koehl U, Toubert A, Zeiser R, Galimberti S. New Approaches for the Treatment of Chronic Graft-Versus-Host Disease: Current Status and Future Directions. Frontiers in Immunology 11 (2020), 578314. dx.doi.org/10.3389/fimmu.2020.578314. eCollection 2020
  • Schmid J-L, Kirchberg M, Sarembe S, Kiesow A, Sculean A, Mäder K, Buchholz M, Eick S. In vitro evaluation of antimicrobial activity of minocycline formulations for topical application in periodontal therapy. Pharmaceutics 12 (2020) 4, 352, 14 Seiten. dx.doi.org/10.3390/pharmaceutics12040352
  • Schnauß J, Schmidt BUS, Brazel CB, Senol D, Losert W, Anderegg U, Käs JA. Influence of hyaluronic acid binding on the actin cortex measured by optical forces. Journal of biophotonics (2020) Artikel-Nr.: e201960215, 9 Seiten. dx.doi.org/10.1002/jbio.201960215
  • Semwal DK, Chauhan A, Semwal RB, Sircar D, Roy P, Lehmann J. Natural molecules having anti-SARS-CoV activity – cannot they be effective against SARS-CoV-2?. Current science 119 (2020) 5, Seite 757-770. dx.doi.org/10.18520/cs/v119/i5/757-770 
  • Shehata AA, Basiouni S, Ali A, Fawzy M, Hafez HM, Ulbert S, Vahlenkamp TW. Immunization of turkeys with a DNA vaccine expressing the haemagglutinin gene of low pathogenic avian influenza virus subtype H9N2. Journal of virological methods 284 (2020) Artikel-Nr.: 113938. dx.doi.org/10.1016/j.jviromet.2020.113938
  • Siccardi S, Adamatzky A, Tuszyński J, Huber F, Schnauß J. Actin networks voltage circuits. Physical Review E 101 (2020), 5, 052314. dx.doi.org/10.1103/PhysRevE.101.052314
  • Sinjari S, Freitag JS, Herold C, Otto O, Smith DM, Stöver HDH. Tunable polymer microgel particles and their study using microscopy and realtime deformability cytometry. Journal of Polymer Science (2020), Seite 2317-2326. dx.doi.org/10.1002/pol.20200274
  • Sun J, Tárnok A, Su X. Deep learning-based single-cell optical image studies. Cytometry Part A 97A (2020) 3, Seite 226-240. dx.doi.org/10.1002/cyto.a.23973
  • Sun J, Wang L, Liu Q, Tárnok A, Su X. Deep learning-based light scattering microfluidic cytometry for label-free acute lymphocytic leukemia classification. Biomedical optics express 11 (2020) 11, Seite 6674-6686. dx.doi.org/10.1364/BOE.405557
  • Tan K, Jäger C, Körschgen H, Geissler S, Schlenzig D, Buchholz M, Stöcker W, Ramsbeck D. Heteroaromatic Inhibitors of the Astacin Proteinases Meprin α, Meprin β and Ovastacin Discovered by a Scaffold-Hopping Approach. ChemMedChem 2020 Dec 23. dx.doi.org/10.1002/cmdc.202000822 
  • Treudler R, Delaroque N, Puder M, Simon JC, Szardenings M. Dupilumab-induced serum sickness-like reaction: an unusual adverse effect in a patient with atopic eczema. Journal of the European Academy of Dermatology and Venereology (2020) 3 Seiten. dx.doi.org/10.1111/jdv.16782
  • Uhlmann RE, Rother C, Rasmussen J, Schelle J, Bergmann C, Ullrich Gavilanes EM, Fritschi SK, Buehler A, Baumann F, Skodras A, Al Shaana R, Beschorner N, Ye L, Kaeser SA, Obermüller U, Christensen S, Kartberg F, Stavenhagen JB, Rahfeld JU, Cynis H, Qian F, Weinreb PH, Bussiere T, Walker LC, Staufenbiel M, Jucker M. Acute targeting of pre-amyloid seeds in transgenic mice reduces Alzheimer-like pathology later in life. Nature Neuroscience 23 (2020), Seite 1580–1588. dx.doi.org/10.1038/s41593-020-00737-w
  • Ulrich H, Pillat MM, Tárnok A. Dengue fever, COVID-19 (SARS-CoV-2), and Antibody-Dependent Enhancement (ADE): a perspective. Cytometry Part A 97 (2020) 6 Seiten. dx.doi.org/10.1002/cyto.a.24047
  • Wagner M, Reinke S, Hänsel R, Klapper W, Braumann U-D. An image dataset related to automated macrophage detection in immunostained lymphoma tissue samples. GigaScience 9 (2020), 9(3):giaa016, dx.doi.org/10.1093/gigascience/giaa016
  • Walcher L, Hilger N, Wege AK, Lange F, Tretbar S, Blaudszun A-R, Fricke S. Humanized mouse model: hematopoietic stemcell transplantation and tracking using short tandem repeat technology. Immunity, inflammation and disease (2020) Seite 1-8. dx.doi.org/10.1002/iid3.317
  • Warnecke A, Harre J, Staecker H, Prenzler N, Strunk D, Couillard-Despres S, Romanelli P, Hollerweger J, Lassacher T, Auer D, Pachler K, Wietzorrek G, Köhl U, Lenarz T, Schallmoser K, Laner-Plamberger S, Falk CS, Rohde E, Gimona M. Extracellular vesicles from human multipotent stromal cells protect against hearing loss after noise trauma in vivo. Clinical and Translational Medicine 10 (2020), 8article number:e262. dx.doi.org/10.1002/ctm2.262
  • Winkel A, Jaimes Y, Melzer C, Dillschneider P, Hartwig H, Stiesch M, von der Ohe J, Strauss S, Vogt PM, Hamm A, Burmeister L, Roger Y, Elger K, Floerkemeier T, Weissinger EM, Pogozhykh O, Müller T, Selich A, Rothe M, Petri S, Köhl U, Hass R, Hoffmann A. Cell culture media notably influence properties of human mesenchymal stroma/stem-like cells from different tissues. Cytotherapy (2020), S1465-3249(20)30792-1. dx.doi.org/10.1016/j.jcyt.2020.07.005.32855067
  • Wüstenhagen DA, Lukas P, Müller C, Aubele SA, Hildebrandt JP, Kubick S. Cell-free synthesis of the hirudin variant 1 of the blood-sucking leech Hirudo medicinalis. Sci Rep, 2020 Nov 13;10(1):19818. dx.doi.org/10.1038/s41598-020-76715-w
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Publikationen 2019

  • Adamatzky A, Huber F, Schnauß J. Computing on actin bundles network. Scientific Reports 9 (2019), 1, 15887, 10 Seiten. dx.doi.org/10.1038/s41598-019-51354-y
  • Adamatzky A, Schnauß J, Huber F. Actin droplet machine. Royal Society Open Science 6 (2019), 12, 191135, 16 Seiten. dx.doi.org/10.1098/rsos.191135
  • Aleksandrova K, Leise J, Priesner C, Melk A, Kubaink F, Abken H, Hombach A, Aktas M, Essl M, Bürger I, Kaiser A, Rauser G, Jurk M, Goudeva L, Glienke W, Arseniev L, Esser R, Köhl U. Functionality and cell senescence of CD4/CD8-selected CD20 CAR T cells manufactured using the automated CliniMACS Prodigy® platform. Transfusion medicine and hemotherapy 45 (2019), 1, Seite 47-54. dx.doi.org/10.1159/000495772
  • Al-Essa MK, Melzer S, Tárnok A. Two-color analysis of leukocytes labeled by modified RBCs and their fragments. Cytometry Part A 95 (2019), 3, Seite 339-346, dx.doi.org/10.1002/cyto.a.23682
  • Anywar G, Kakudidi E, Byamukama R, Mukonzo J, Schubert A, Oryem-Origa H. Indigenous traditional knowledge of medicinal plants used by herbalists in treating opportunistic infections among people living with HIV/AIDS in Uganda. Journal of Ethno­pharmacology 246 (2020), article 112205 13 Seiten, dx.doi.org/10.1016/j.jep.2019.112205
  • Aswal S, Kumar A, Semwal RB, Chauhan A, Kumar A, Lehmann J, Semwal DK. Drimia indica: a plant used in traditional medicine and its potential for clinical uses. Medicina 55 (2019), 6, 16 Seiten, dx.doi.org/10.3390/
    medicina55060255
  • Ayobahan SU, Eilebrecht E, Kotthoff M, Baumann L, Eilebrecht S, Teigeler M, Hollert H, Kalkhof S, Schäfers C. A combined FSTRA-shotgun proteomics approach to identify molecular changes in zebrafish upon chemical exposure. Scientific reports 9 (2019), 6599, 12 Seiten. dx.doi.org/10.1038/s41598-019-43089-7
  • Ayobahan SU, Eilebrecht S, Baumann L, Teigeler M, Hollert H, Kalkhof S, Eilebrecht E, Schäfers C. Detection of biomarkers to differentiate endocrine disruption from hepato­toxicity in zebrafish (Danio rerio) using proteomics. Chemosphere 240 (2020), 124970, 12 Seiten.
    dx.doi.org/10.1016/j.chemosphere.2019.124970
  • Barth M, Gröger V, Cynis H, Staege MS. Identification of human endogenous retro­virus transcripts in Hodgkin Lymphoma cells. Molecular biology reports 46 (2019)2, Seite 1885-1893, dx.doi.org/10.1007/s11033-019-04640-x
  • Behm LVJ, Gerike S, Grauel MK, Uhlig K, Pfisterer F, Baumann W, Bier FF, Duschl C, Kirschbaum M. Micropatterned thermo­responsive cell culture substrates for dynamically controlling neurite out­growth and neuronal connectivity in vitro. ACS Applied Bio Mater 7 (2019), 2, 2853-2861. dx.doi.org/10.1021/acsabm.9b00246
  • Belkum A, Bachmann TT, Lüdke G et al. Developmental roadmap for antimicrobial susceptibility testing systems. Nature Reviews Microbiology 17 (2019), S. 51-62. dx.doi.org/10.1038/s41579-018-0098-9
  • Bender P, Egger A, Westermann M, Taudte N, Sculean A, Potempa J, Möller B, Buchholz M, Eick S. Expression of human and Porphyro­monas gingivalis glutaminyl cyclases in periodontitis and rheumatoid arthritis – a pilot study. Archives of oral biology 97 (2019), January, Seite 223-230, dx.doi.org/10.1016/j.archoralbio.2018.10.022
  • Bengtsson E, Tárnok A. Special section on image cytometry. Cytometry Part A 95 (2019), 4, Seite 363-365, dx.doi.org/10.1002/cyto.a.23762
  • Binner C, Wagner J, Schmalz G, Eisner M, Rast J, Kottmann T, Haak R, Oberbach A, Borger MA, Garbade J, Ziebolz D. Insufficient oral behaviour and the high need for periodontal treatment in patients with heart insufficiency and after heart transplantation: a need for special care programs? Journal of Clinical Medicine 8 (2019), 10, Articel 1668, 10 Seiten. dx.doi.org/10.3390/jcm8101668
  • Bitar M, Boldt A, Freitag MT, Gruhn B, Köhl U, Sack U. Evaluating STAT5 phosphoryla­tion as a mean to assess T cell proliferation. Frontiers in immunology 10 (2019), article 722, 11 Seiten. dx.doi.org/10.3389/fimmu.2019.00722
  • Blaess M, Deigner HP. Derailed ceramide metabolism in atopic dermatitis (AD): a causal starting point for a personalized (basic) therapy. International journal of molecular sciences 20 (2019), 16, 15 Seiten, dx.doi.org/10.3390/ijms20163967
  • Bocker HT, Heinrich T, Liebmann L, Hennings JC, Seemann E, Gerth M, Jakovčevski I, Preobraschenski J, Kessels MM, Westermann M, Isbrandt D, Jahn R, Qualmann B, Hübner CA. The Na+/H+ exchanger Nhe1 modulates network excitability via GABA release. Cerebral cortex 13 (2019), 29, Seite 4263-4276, dx.doi.org/10.1093/cercor/bhy308
  • Bozza FA, Moreira-Soto A, Rockstroh A, Fischer C, Nascimento AD, Calheiros AS, Drosten C, Bozza PT, Souza TML, Ulbert S, Drexler JF. Differential shedding and antibody kinetics of Zika and Chikungunya Viruses, Brazil. Emerging Infectious Diseases 25(2019), 2, Seiten 311-315. dx.doi.org/10.3201/eid2502.180166
  • Bremm M, Pfeffermann LM, Cappel C, Katzki V1, Erben S, Betz S, Quaiser A, Merker M, Bonig H, Schmidt M, Klingebiel T, Bader P, Huenecke S, Rettinger E. Improving clinical manu­facturing of IL-15 activated cytokine-induced killer (CIK) cells. Frontiers in immunology 10 (2019), Artikel 1218, 12 Seiten. dx.doi.org/10.3389/fimmu.2019.01218
  • Bursch F, Rath KJ, Sarikidi A, Böselt S, Kefalakes E, Osmanovic A, Thau-Habermann N, Klöß S, Köhl U, Petri S. Analysis of the therapeutic potential of different administration routes and frequencies of human mesenchymal stromal cells in the SOD1G93A mouse model of amyotrophic lateral sclerosis. J Tissue Eng Regen Med. 2019 Apr;13(4):649-663. dx.doi.org/10.1002/term.2846. Epub 2019 Mar 20.
  • Comoli P, Chabannon C, Koehl U, Lanza F, Urbano-Ispizua A, Hudecek M, Ruggeri A, Secondino S, Bonini C, Pedrazzoli P. Development of adaptive immune effector therapies in solid tumors. Ann Oncol. 2019 Nov 1;30(11):1740-1750. dx.doi.org/10.1093/annonc/mdz285
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Guidelines for the use of flow cytometry and cell sorting in immuno­logical studies (second edition). European Journal of Immunology 49 (2019), 10, Seiten 1457-1973. dx.doi.org/10.1002/eji.201970107
  • Costa-Marques L, Katrin K, Pardon M, Leovsky C, Swarbrick S, Fabian C, Stolzing A. Transplantation of bone marrow derived macrophages reduces markers of neuropathology in an APP/PS1 mouse model. Translational Neurodegeneration 8 (2019), 33, 11 Seiten. dx.doi.org/10.1186/s40035-019-0173-9
  • Czechowska K, Lannigan J, Wang L, Arcidiacono J, Ashhurst TM, Barnard RM, Bauer S, Bispo C, Bonilla DL, Brinkman RR, Cabanski M, Chang HD, Chakrabarti L, Chojnowski G, Cotleur B, Degheidy H, Dela Cruz GV, Eck S, Elliott J, Errington R, Filby A, Gagnon D, Gardner R, Green C, Gregory M, Groves CJ, Hall C, Hammes F, Hedrick M, Hoffman R, Icha J, Ivaska J, Jenner DC, Jones D, Kerckhof FM, Kukat C, Lanham D, Leavesley S, Lee M, Lin-Gibson S, Litwin V, Liu Y, Molloy J, Moore JS, Müller S, Nedbal J, Niesner R, Nitta N, Ohlsson-Wilhelm B, Paul NE, Perfetto S, Portat Z, Props R, Radtke S, Rayanki R, Rieger A, Rogers S, Rubbens P, Salomon R, Schiemann M, Sharpe J, Sonder SU, Stewart JJ, Sun Y, Ulrich H, Van Isterdael G, Vitaliti A,  van Vreden C, Weber M, Zimmermann J, Vacca G, Wallace P, Tárnok A. Cyt-Geist: current and future challenges in Cytometry: reports of the CYTO 2018 conference workshops. Cytometry Part A 95 (2019), 6, Seite 598-644, dx.doi.org/10.1002/cyto.a.23777
  • de Vera J-P, Alawi M, Backhaus T, Baqué M, Billi D, Böttger U, Berger T, Cockell C, Demets R, Noetzel R d l T, Edwards H, Elsaesser A, Fagliarone C, Fiedler A, Foing B, Foucher F, Fritz J, Hanke F, Herzog T, Horneck G, Hübers H-W, Huwe B, Joshi J, Kozyrovska N, Kruchten M, Lasch P, Lee N, Leya T, Lorek A, Moritz S, Möller R, Olsson-Francis K, Onofri S, Ott S, Pacelli C, Podolich O, Martínez-Frías J, Rabbow E, Reitz G, Rettberg P, Reva O, Rothschild L, Sancho L G, Schulze-Makuch D, Selbmann L, Serrano P, Szewzyk U, Verseux C, Wagner D, Westall F, Wolter D, Zucconi L. Limits of life and the habitability of Mars: The ESA space experiment BIOMEX on the ISS. Astrobiology 19 (2019), 2, Seiten 145-157. dx.doi.org/10.1089/ast.2018.1897
  • Dluczek S, Tretbar US, Fricke S, Koehl U. CAR-T-Zellen: Update 2019. Transfusionsmedizin 9 (2019), 3, Seiten 187-200, dx.doi.org/10.1055/a-0833-2631
  • Dondapati SK, Lübberding H, Zemella A, Thoring L, Wüstenhagen DA, Kubick S. Functional reconstitution of membrane proteins derived from Eukaryotic Cell-Free Systems. Frontiers in Pharma­cology (2019), 9 Seiten. dx.doi.org/10.3389/fphar
  • Dondapati SK, Pietruschka G, Thoring L, Wüstenhagen DA, Kubick S. Cell-free synthesis of human toll-like receptor 9 (TLR9): Optimization of synthesis conditions and functional analysis. PLoS One 14 (2019), 4, e0215897, 16 Seiten. dx.doi.org/10.1371/journal.pone.0215897
  • Fayad L, Oberbach A, Schweitzer M, Askin F, Voltaggio L, Larman T, Enderle M, Hahn H, Khashab MA, Kalloo AN, Kumbhari V. Gastric mucosal devitalization (GMD): translation to a novel endoscopic metabolic therapy. Endoscopy Inter­national Open (2019), 07, 6 Seiten. dx.doi.org/10.1055/a-0957-3067
  • Fayad L, Schweitzer M, Raad M, Simsek C, Oleas R, Dunlap MK, Shah T, Doshi J, El Asmar M, Oberbach A, Singh VK, Steele K, Magnussen T, Kalloo AN, Khashab MA, Kumbhari V. A real-world, insurance-based algorithm using the two-fold running suture technique for transoral outlet reduction for weight regain and dumping syndrome after Roux-En-Y gastric bypass. Obesity Surgery 29 (2019), Seiten 2225-2232. dx.doi.org/10.1007/s11695-019-03828-1
  • Fayad L, Simsek C, Oleas R, Ichkhanian Y, Fayad GE, Ngamreungphong S, Schweitzer M, Oberbach A, Kalloo AN, Khashab MA, Kumbhari V. Safety and efficacy of endoscopically secured fully covered self-expandable metallic stents (FCSEMS) for post-bariatric complex Stenosis. Obesity Surgery 29 (2019), Seiten 3484-3492. dx.doi.org/10.1007/s11695-019-04021-0
  • Frimmel S, Hinz M, Schipper J, Bogdanow S, Mitzner S, Koball S. Cytokine adsorption is a promising tool in the therapy of hemophagocytic lymphohistiocytosis. International Journal of Artificial Organs 42 (2019), 11,
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  • Gialluisi A, Andlauer TFM, Mirza-Schreiber N, Moll K, Becker J, Hoffmann P, Ludwig KU, Czamara D, St Pourcain B, Brandler W, Honbolygó F, Tóth D, Csépe V, Huguet G, Morris AP, Hulslander J, Willcutt EG, DeFries JC, Olson RK, Smith SD, Pennington BF, Vaessen A, Maurer U, Lyytinen H, Peyrard-Janvid M, Leppänen PHT, Brandeis D, Bonte M, Stein JF, Talcott JB, Fauchereau F, Wilcke A, Francks C, Bourgeron T, Monaco AP, Ramus F, Landerl K, Kere J, Scerri TS, Paracchini S, Fisher SE, Schumacher J, Nöthen MM, Müller-Myhsok B, Schulte-Körne G. Genome-wide association scan identifies new variants associated with a cognitive predictor of dyslexia. Translational psychiatry 9 (2019), 1, article no 77, 15 Seiten, dx.doi.org/10.1038/s41398-019-0402-0
  • Godino N, Pfisterer F, Gerling T, Guernth-Marschner C, Duschl C, Kirschbaum M. Combining dielectrophoresis and computer vision for precise and fully automated single-cell handling and analysis. Lab on a Chip 24 (2019), 19, Seiten 4016-4020. dx.doi.org/10.1039/c9lc00800d
  • Golde T, Glaser M, Tutmarc C, Elbalasy I, Huster C, Busteros G, Smith DM, Herrmann H, Käs JA, Schnauß J. The role of stickiness in the rheology of semiflexible polymers. Soft matter 15 8 (2019), Seite 4865-4872, dx.doi.org/10.1039/C9SM00433E
  • Haange SB, Jehmlich N, Hoffmann M, Weber K, Lehmann J, von Bergen M, Slanina U. Disease development is accompanied by changes in bacterial protein abundance and functions in a refined model of dextran sulfate sodium (DSS)-induced colitis. Journal of proteome research 18 (2019), 4, Seite 1774-1786, dx.doi.org/10.1021/acs.jproteome.8b00974
  • Haehnel S, Reiche K, Loeffler D, Horn A, Blumert C, Puppel SH, Kaiser N, Rapp F, Rade M, Horn F, Meixensberger J, Bechmann I, Gaunitz F, Winter K. Deep sequencing and automated histo­chemistry of human tissue slice cultures improve their usability as preclinical model for cancer research. Sci Rep. 2019 Dec 27;9(1):19961
  • Hartlage-Rübsamen M, Ratz V, Zeitschel U, Finzel L, Machner L, Köppen J, Schulze A, Demuth HU, von Hörsten S, Höfling C, Rossner S. Endo­genous mouse huntingtin is highly abundant in cranial nerve nuclei, coaggregates to Abeta plaques and is induced in reactive astrocytes in a transgenic mouse model of Alzheimer’s disease. Acta Neuropathologica Communications, (2019) 7:79
  • Hays JP, Mitsakakis K, Luz S, Van Belkum A, Becker K, Van den Bruel A, Harbarth S, Rex JH, Simonsen GS, Di Gregori V, Lüdke G, Van Staa T, Moran-Gilad J, Bachmann TT, JPIAMR AMR-RDT consortium. The successful uptake and sustainability of rapid infectious disease and antimicrobial resistance point-of-care testing requires a complex »mix-and-match« implementation package. European Journal of Clinical Microbiology & Infectious Diseases 38 (2019), Seiten 1015–1022. dx.doi.org/10.1007/s10096-019-03492-4
  • Hillmann A, Paebst F, Brehm W, Piehler D, Schubert S, Tárnok A, Burk J. A novel direct co-culture assay analyzed by multicolor flow cytometry reveals context- and cell type-specific immunomodulatory effects of equine mesen­chymal stromal cells. PLoS one 14 (2019), 6, 21 Seiten, dx.doi.org/10.1371/journal.pone.0218949
  • Huber R, Kirsten H, Näkki A, Pohlers D, Thude H, Eidner T, Heinig M, Brand K, Ahnert P, Kinne RW. Association of human FOS promoter variants with the occurrence of knee-osteoarthritis in a case control association study. International journal of molecular sciences 20 (2019), 6, 13 Seiten, dx.doi.org/10.3390/ijms20061382
  • Kämpf C, Specht M, Scholz A, Puppel SH, Doose G, Reiche K, Schor J, Hackermüller J. uap: reproducible and robust HTS data analysis. BMC Bionformatics, 20 (2019), 664, 9 Seiten. dx.doi.org/10.1186/s12859-019-3219-1
  • Kern K, Havenith H, Delaroque N, Rautenberger P, Lehmann J, Fischer M, Spiegel H, Schillberg S, Ehrentreich-Foerster E, Aurich S, Treudler R, Szardenings M. The immunome of soy bean allergy: comprehensive identification and characterization of epitopes. Clinical & experimental allergy 49 (2019), 2, Seite 239-251, dx.doi.org/10.1111/cea.13285
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  • Küster E, Kalkhof S, Aulhorn S, von Bergen M, Gündel U. Effects of five substances with different modes of action on cathepsin H, C and L activities in zebrafish embryos. International journal of environmental research and public health 16 (2019), 20, 15 Seiten, dx.doi.org/10.3390/ijerph16203956
  • Lienau C, Gräwert T, Alves Avelar LA, Illarionov B, Held J, Knaab TC, Lungerich B, van Geelen L, Meier D, Geissler S, Cynis H, Riederer U, Buchholz M, Kalscheuer R, Bacher A, Mordmüller B, Fischer M, Kurz T. Novel reverse thia-analogs of fosmidomycin: synthesis and antiplasmodial activity. European journal of medicinal chemistry 181 (2019), Artikel 111555, 12 Seiten, dx.doi.org/10.1016/j.ejmech.2019.07.058
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  • Luehr M, Bauernschmitt N, Peterss S, Li Y, Heyn O, Dashkevich A, Oberbach A, Bagaev E, Pichlmaier MA, Juchem G, Hagl C. Incidence and surgical outcomes of patients with native and prosthetic aortic valve endocarditis. Annals of Thoracic Surgery (2019) pre-proof. dx.doi.org/10.1016/j.athoracsur.2019.10.029
  • Mahmoud M, Laufer S, Deigner HP. Visual aptamer-based capillary assay for ethanolamine using magnetic particles and strand displacement. Mikrochimica acta 186 (2019), 11, 8 Seiten, dx.doi.org/10.1007/s00604-019-3795-9
  • Mahmoud M, Laufer S, Deigner HP. Data for homogeneous thermofluorimetric assays for ethanolamine using aptamers and a PCR instrument. Data in brief 24 (2019), 103946, 11 Seiten, dx.doi.org/10.1016/j.dib.2019.103946
  • Mahmoud M, Laufer S, Deigner HP. An aptamer based thermofluorimetric assay for ethanolamine. Biochimie 158 (2019), Seite 233-237, dx.doi.org/10.1016/j.biochi.2019.01.014
  • Oberbach A, Friedrich M, Lehmann S, Schlichting N, Kullnick Y, Gräber S, Buschmann T, Hagl C, Bagaev E; CardiOmics group; Clinical Microbiology group; Bioinformatics group. Bacterial infiltration in structural heart valve disease. The journal of thoracic and cardiovascular surgery (2019), [Epub ahead of print], dx.doi.org/10.1016/j.jtcvs.2019.02.019
  • Oberbach A, Schlichting N, Friedrich M, Lehmann S, Kullnick Y, Pichlmaier M, Hagl C, Bagaev E; CardiOmics group; Clinical Microbiology group; Clinical; Management group. Quantification of Multiple Bacteria in Calcified Structural Valvular Heart Disease. Semin Thorac Cardiovasc Surg. 2019 Oct 9. pii: S1043-0679(19)30319-3. dx.doi.org/10.1053/j.semtcvs.2019.10.003
  • Oberbach A, Schlichting N, Kullnick Y, Heinrich M, Lehmann S, Retschlag U, Friedrich M, Fayad L, Dietrich A, Khashab MA, Kalloo AN, Kumbhari V. Gastric mucosal devitalization improves blood pressure, renin and cardio­vascular lipid deposition in a rat model of obesity. Endoscopy International Open 07 (2019), 11 Seiten. dx.doi.org/10.1055/a-0990-9683
  • Oberschmidt O, Morgan M, Huppert V, Kessler J, Gardlowski T, Matthies N, Aleksandrova K, Arseniev L, Schambach A, Koehl U, Kloess S. Development of Automated Separation, Expansion, and Quality Control Protocols for Clinical-Scale Manufacturing of Primary Human NK Cells and Alpharetroviral Chimeric Antigen Receptor Engineer­ing. Hum Gene Ther Methods. 2019 Jun;30(3):102-120. dx.doi.org/10.1089/hgtb.2019.039. Epub 2019 May 16
  • Procházková L, Leya T, Křížková H, Nedbalová L. Sanguina nivaloides and Sanguina aurantia gen. et spp. nov. (Chlorophyta): the taxonomy, phylogeny, biogeography and ecology of two newly recognised algae causing red and orange snow. FEMS Microbiol. Ecol. 95(6), (2019), fiz064
  • Rauwald HW, Liebold T, Grötzinger K, Lehmann J, Kuchta K. Labdanum and Labdanes of Cistus creticus and C. ladanifer: anti-Borrelia activity and its phytochemical profiling. Phytomedicine 60 (2019), article 152977, dx.doi.org/10.1016/j.phymed.2019.152977
  • Rockstroh A, Moges B, Berneck BS, Sattler T, Revilla-Fernández S, Schmoll F, Pacenti M, Sinigaglia A, Barzon L, Schmidt-Chanasit J, Nowotny N, Ulbert S. Specific detection and differentiation of tick-borne encephalitis and West Nile virus induced IgG antibodies in humans and horses. Transboundary and emerging diseases 66 (2019), 4, 8 Seiten, dx.doi.org/10.1111/tbed.13205
  • Ruppert C, Phogat N, Laufer S, Kohl M, Deigner HP. A smartphone readout system for gold nanoparticle-based lateral flow assays: application to monitoring of digoxigenin. Mikrochimica acta 186 (2019), 2,9 Seiten, dx.doi.org/10.1007/s00604-018-3195-6
  • Sandetskaya N, Isserstedt-John N, Koelsch A, Schattschneider S, Kuhlmeier D. An integrated homogeneous SPARCL™ immunoassay for rapid biomarker detection on a chip. Analytical methods 11 (2019), 19, Seite 2542-2550, dx.doi.org/10.1039/c9ay00198k
  • Sass S, Stöcklein WFM, Klevesath A, Hurpin J, Menger M, Hille C. Binding affinity data of DNA aptamers for therapeutic anthracyclines from micro­scale thermophoresis and surface plasmon resonance spectroscopy. Analyst. 144 (2019), 20, S. 6064-6073
  • Schüttler A, Altenburger R, Ammar M, Bader-Blukott M, Jakobs G, Knapp J, Krüger J, Reiche K, Wu GM, Busch W. Map and model-moving from observation to prediction in toxicogenomics. GigaScience 8 (2019), 6, 22 Seiten, dx.doi.org/10.1093/gigascience/giz057
  • Simsek C, Ichkhanian Y, Fayad L, Steele KE, Schweitzer MA, Lamond K, Vosoughi K, Doshi J, Shah T, Oberbach A, Al-Sabban A, Gandsas A, Kalloo AN, Khashab MA, Kumbhari V. Secured lumen-apposing fully covered metallic stents for Stenoses in post-bariatric surgery patients. Obesity Surgery 29 (2019), Seiten 2695-2699. dx.doi.org/10.1007/s11695-019-03906-4
  • Sinet-Mathiot V, Smith GM, Romandini M, Wilcke A, Peresani M, Hublin JJ, Welker F. Combining ZooMS and zooarchaeology to study Late Pleistocene hominin behaviour at Fumane (Italy). Scientific reports 9 (2019), 1, article 12350, 13 Seiten, dx.doi.org/10.1038/s41598-019-48706-z
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  • Szendy M, Kalkhof S, Bittrich S, Kaiser F, Leberecht C, Labudde D, Noll M. Structural change in GadD2 of Listeria monocytogenes field isolates supports nisin resistance. International journal of food microbiology 305 (2019), article 108240, dx.doi.org/10.1016/j.ijfoodmicro.2019.108240
  • Thabet A, Schmäschke R, Fertey J, Bangoura B, Schönfelder J, Lendner M, Ulbert S, Daugschies A. Eimeria tenella oocysts attenuated by low energy electron irradia­tion (LEEI) induce protection against challenge infection in chickens. Veterinary parasitology 266 (2019), Seite 18-26, dx.doi.org/10.1016/j.vetpar.2019.01.001
  • Ueberham E, Spiegel H, Havenith H, Rautenberger P, Lidzba N, Schillberg S, Lehmann J. Simplified tracking of a soy allergen in processed food using a monoclonal antibody-based sandwich ELISA targeting the soybean 2S albumin gly m 8. Journal of agricultural and food chemistry 67 (2019), 31, Seite 8660-8667, dx.doi.org/10.1021/acs.jafc.9b02717
  • Ulbert S. West Nile virus vaccines – current situation and future directions. Human vaccines & immunotherapeutics 15 (2019), 10, Seite 2337-2342, dx.doi.org/10.1080/21645515.2019.1621149
  • Valainis D, Dondl P, Foehr P, Burgkart R, Kalkhof S, Duda GN, van Griensven M, Poh PSP. Integrated additive design and manufacturing approach for the bioengineering of bone scaffolds for favorable mechanical and biological properties. Biomedical Materials 14 (2019), 6, Articel 065002, 14 Seiten. dx.doi.org/10.1088/1748-605X/ab38c6
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  • Walcher L, Müller C, Hilger N, Kretschmer A, Stahl L, Wigge S, Rengelshausen J, Müller AM, Fricke S. Effect of combined sublethal X-ray irradiation ancyclosporine a treatment in NOD scid gamma (NSG) mice. Experimental animals 68 (2019), 1, Seite 1-11, dx.doi.org/10.1538/expanim.18-0056
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  • Wittenbrink N, Herrmann S, Blazquez-Navarro A, Bauer Ch, Lindberg E, Reinke P, Sawitzki B, Thomusch O, Hugo Ch, Babel N, Seitz H, Or-Guil M. A novel approach reveals that HLA class 1 single antigen bead-signatures provide a means of high-accuracy pre-transplant risk assessment of acute cellular rejection. BMC Immunology 20 (2019), Articel 11, 10 Seiten. dx.doi.org/10.1186/s12865-019-0291-2
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Publikationen 2018

  • Andersen JL, Fagerberg R, Flamm C, Kianian R, Merkle D, Stadler PF. Towards mecha­nistic prediction of mass spectra using graph trans­formation. Match 80 (2018), Nr.3, S. 705-731. http://match.pmf.kg.ac.rs/electronic_versions/Match80/n3/match80n3_705-731.pdf
  • Andersen JL, Flamm C, Merkle D, Stadler PF. Rule composition in graph transformation models of chemical reactions. Match 80 (2018), Nr.3, S. 661-704. http://match.pmf.kg.ac.rs/electronic_versions/Match80/n3/match80n3_661-704.pdf
  • Bahner N, Reich P, Frense D, Menger M, Schieke K, Beckmann D. An aptamer-based biosensor for detection of doxorubicin by electro­chemical impedance spectroscopy. Analytical and Bioanalytical Chemistry 410 (2018), 5, S. 1453-1462. dx.doi.org/10.1007/s00216-017-0786-8
  • Baqué M, Hanke F, Böttger U, Leya T, Moeller R, Vera JP de. Protection of cyanobacterial carotenoids‘ Raman signatures by Martian mineral analogues after high-dose gamma irradiation. Journal of Raman Spectroscopy 49 (2018), 10, S. 1617-1627. dx.doi.org/10.1002/jrs.5449
  • Bayer L, Fertey J, Ulbert S, Grunwald T. Immunization with an adjuvanted low-energy electron irradiation inactivated respiratory syncytial virus vaccine shows immunoprotective activity in mice. Vaccine 36 (2018), 12, S. 1561-1569. dx.doi.org/10.1016/j.vaccine.2018.02.014
  • Bayer L, Gümpel J, Hause G, Müller M, Grunwald T. Non-human papillomaviruses for gene delivery in vitro and in vivo. PLoS one 13 (2018), Art. e0198996, 14 S. dx.doi.org/10.1371/journal.pone.0198996
  • Behm LVJ, Schlenther I, Petrausch M, Jorde F, Godino N, Pfisterer F, Duschl C, Kirschbaum M. A simple approach for the precise measurement of surface temperature distributions on the microscale under dry and liquid conditions based on thin Rhodamine B films. Sensors and Actuators B-Chemical 255 (2018), S. 2023-2031. dx.doi.org/10.1016/j.snb.2017.09.001
  • Bender P, Egger A, Westermann M, Taudte N, Sculeana A, Potempa J, Möller B, Buchholz M, Eick S. Expression of human and Porphyro­monas gingivalis glutaminyl cyclases in periodontitis and rheumatoid arthritis – A pilot study. Archives of Oral Biology, 97 (2019),S. 223-230. dx.doi.org/10.1016/j.archoralbio.2018.10.022
  • Blaess M, Bibak N, Claus RA, Kohl M, Bonaterra GA, Kinscherf R, Laufer S, Deigner HP. NB 06: From a simple lysosomotropic aSMase inhibitor to tools for elucidating the role of lysosomes in signaling apoptosis and LPS-induced inflammation. European journal of medicinal chemistry 153 (2018), S. 73-104. dx.doi.org/10.1016/j.ejmech.2017.09.021
  • Blod C, Schlichting N, Schülin S, Suttkus A, Peukert N, Stingu CS, Hirsch C, Elger W, Lacher M, Bühligen U, Mayer S. The oral microbiome - the relevant reservoir for acute pediatric appendicitis? International journal of colorectal disease 33 (2018), Nr.2, S. 209-218. dx.doi.org/10.1007/s00384-017-2948-8
  • Boltze J, Ferrara F, Hainsworth AH, Bridges LR, Zille M, Lobsien D, Barthel H, McLeod DD, Gräßer F, Pietsch S, Schatzl AK, Dreyer AY, Nitzsche B. Lesional and perilesional tissue characterization by automated image processing in a novel gyrencephalic animal model of peracute intracerebral hemorrhage. Journal of cerebral blood flow and metabolism Cereb Blood Flow Metab. 2018 (vorab online). dx.doi.org/10.1177/0271678X18802119
  • Canzler S, Stadler PF, Schor J. The fungal snoRNAome. RNA 24 (2018), 3, S. 342-360. dx.doi.org/10.1261/rna.062778.117
  • Donath A, Stadler PF. Split-inducing indels in phylo­genomic analysis. Algorithms for molecular biology. Online journal 13 (2018), Art. 12, 12 S. / dx.doi.org/10.1186/s13015-018-0130-7
  • Dondapati SK, Wüstenhagen DA, Strauch E, Kubick S. Cell-free production of pore forming toxins: Functional analysis of thermostable direct hemo­lysin from Vibrio parahaemolyticus. Engineering in Life Sciences 18 (2018), 2, S. 140-148. dx.doi.org/10.1002/elsc.201600259
  • Dunkelmann T, Teichmann K, Ziehm T, Schemmert S, Frenzel D, Tusche M, Dammers C, Jürgens D, Langen KJ, Demuth HU, Shah NJ, Kutzsche J, Willuweit A, Willbold D. Aβ oligomer eliminating compounds interfere successfully with pEAβ(3–42) induced motor neuro­degenerative phenotype in transgenic mice. Neuropeptides 67 (2018), S. 27-35. dx.doi.org/10.1016/j.npep.2017.11.011
  • Engel MC, Smith DM, Jobst MA, Sajfutdinow M, Liedl T, Romano F, Rovigatti L, Louis AA, Doye JPK. Force-induced unravelling of DNA origami. ACS nano 12 (2018), 7, S. 6734-6747. dx.doi.org/10.1021/acsnano.8b01844
  • Essig K, Kronbeck N, Guimaraes JC, Lohs C, Schlundt A, Hoffmann A, Behrens G, Brenner S, Kowalska J, Lopez-Rodriguez C, Jemielity J, Holtmann H, Reiche K, Hackermüller J, Sattler M, Zavolan M, Heissmeyer V. Roquin targets mRNAs in a 3‘-UTR-specific manner by different modes of regulation. Nature Communi­cations 9 (2018), Art. 3810. dx.doi.org/10.1038/s41467-018-06184-3
  • Fagerberg R, Flamm C, Kianian R, Merkle D, Stadler PF. Finding the K best synthesis plans. Journal of cheminformatics. Online journal 10 (2018), Art. 19, 21 S. dx.doi.org/10.1186/s13321-018-0273-z
  • Fingas F, Rückner A, Heenemann K, Volke D, Sieg M, Bielefeldt P, Grunwald T, Vahlenkamp TW, Hassert R, Hoffmann R. Highly sensitive ELISA for the serological detection of murine rotavirus EDIM based on its major immunogen VP6. Journal of Virological Methods 262 (2018), S. 72-78. dx.doi.org/10.1016/j.jviromet.2018.07.016
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  • Fornefett J, Krause J, Klose K, Fingas F, Hassert R, Eisenberg T, Schrödl W, Grunwald T, Müller U, Baums CG. Comparative analysis of clinics, pathologies and immune responses in BALB/c and C57BL/6 mice infected with Streptobacillus moniliformis. Microbes and infection 20 (2018), 2, S. 101-110. dx.doi.org/10.1016/j.micinf.2017.10.001
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  • Gröger V, Cynis H. Human endogenous retroviruses and their putative role in the development of autoimmune disorders such as Multiple Sclerosis. Frontiers in Micro­biology 9 (2018), 265. dx.doi.org/10.3389/fmicb.2018.00265
  • Grünberg M, Quandt D, Cynis H, Demuth HU, Kindermann A, Magdolen V, Forssmann WG, Seliger B, Mägert HJ. Kallikrein-related peptidases are activators of the CC chemokine CCL14. European Journal of Immunology 48 (2018), 9, S. 1592-1594. dx.doi.org/10.1002/eji.201747452
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  • Hoffmann A, Fallmann J, Vilardo E, Mörl M, Stadler PF, Amman F. Accurate mapping of tRNA reads. Bioinformatics 34 (2018), Nr.7, S. 1116-1124. dx.doi.org/10.1093/bioinformatics/btx756
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  • Kern K, Havenith H, Delaroque N, Rautenberger P, Lehmann J, Fischer M, Spiegel H, Schillberg S, Ehrentreich-Foerster E, Aurich S, Treudler R, Szardenings M. The immunome of soybean allergy: Comprehensive identification and characterization of epitopes. Clinical & experimental allergy 49 (2019), 2, S. 239-251. dx.doi.org/10.1111/cea.13285
  • Kersting, S, Rausch, V, Bier, FF, von Nickisch-Rosenegk, M. A recombinase polymerase amplification assay for the diagnosis of atypical pneumonia. Analytical Biochemistry 550 (2018),
    S. 54-60. dx.doi.org/10.1016/j.ab.2018.04.014
  • Knigge X, Wenger C, Bier FF, Hölzel R. Dielectrophoretic immobilisation of nano­particles as isolated singles in regular arrays. Journal of Physics D-Applied Physics 51 (2018), 6, 065308, 10 S. dx.doi.org/10.1088/1361-6463/aaa528
  • Koertge A, Wasserkort R, Wild T, Mitzner S. Extracorporeal Hemoperfusion as a Potential Therapeutic Option for Critical Accumulation of Rivaroxaban. Blood Purification 45 (2018), 126–128. dx.doi.org/10.1159/000484923
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  • Prohaska SJ, Berkemer SJ, Gärtner F, Gatter T, Retzlaff N, Students of the Graphs and Biological Networks Lab 2017, Höner Zu Siederdissen C, Stadler PF. Expansion of gene clusters, circular orders, and the shortest Hamiltonian path problem. Journal of mathematical biology 77 (2018), Nr.2, S. 313-341. dx.doi.org/10.1007/s00285-017-1197-3
  • Quaiser A, Köhl U. Was ist gesichert bei den Zelltherapien?: Möglichkeiten und Grenzen in der Immunonkologie. [What is established in cell therapies?: Possibilities and limits in immuno-oncology]. Internist (Berl). 59 (2018), 12, S. 1230-1238. dx.doi.org/10.1007/s00108-018-0516-0
  • Ramsbeck D, Hamann A, Richter G, Schlenzig D, Geissler S, Nykiel V, Cynis H, Schilling S, Buchholz M. Structure-guided design, synthesis and characteriza­tion of next-generation meprin β inhibitors. Journal of medicinal chemistry 61 (2018), 10, S. 4578-4592. dx.doi.org/10.1021/acs.jmedchem.8b00330
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  • Riemschneider S, Kohlschmidt J, Fueldner C, Esser C, Hauschildt S, Lehmann J. Aryl hydrocarbon receptor activation by benzo(a)pyrene inhibits proliferation of myeloid precursor cells and alters the differentiation state as well as the functional phenotype of murine bone marrow-derived macro­phages. Toxicology letters 296 (2018), S. 106-113. dx.doi.org/10.1016/j.toxlet.2018.07.050
  • Rosendahl J, Kirsten H, Hegyi E, Kovacs P, Weiss FU, Laumen H, Lichtner P, Ruffert C, Chen JM, Masson E, Beer S, Zimmer C, Seltsam K, Algül H, Bühler F, Bruno MJ, Bugert P, Burkhardt R, Cavestro GM, Cichoz-Lach H, Farré A, Frank J, Gambaro G, Gimpfl S, Grallert, Griesmann H, Grützmann R, Hellerbrand C, Hegyi P, Hollenbach M, Iordache S, Jurkowska G, Keim V, Kiefer F, Krug S, Landt O, Leo MD, Lerch MM, Lévy P, Löffler M, Löhr M, Ludwig M, Macek M, Malats N, Malecka-Panas E, Malerba G, Mann K, Mayerle J, Mohr S, Te Morsche RHM, Motyka M, Mueller S, Müller T, Nöthen MM, Pedrazzoli S, Pereira SP, Peters A, Pfützer R, Real FX, Rebours V, Ridinger M, Rietschel M, Rösmann E, Saftoiu A, Schneider A, Schulz HU, Soranzo N, Soyka M, Simon P, Skipworth J, Stickel F, Strauch K, Stumvoll M, Testoni PA, Tönjes A, Werner L, Werner J, Wodarz N, Ziegler M, Masamune A, Mössner J, Férec C, Michl P, P H Drenth J, Witt H, Scholz M, Sahin-Tóth M; all members of the PanEuropean Working group on ACP. Genome-wide association study identifies inversion in the CTRB1-CTRB2 locus to modify risk for alcoholic and non-alcoholic chronic pancreatitis. Gut 67 (2018), 10, S. 1855-1863. dx.doi.org/10.1136/gutjnl-2017-314454
  • Rüppel N, Tröger V, Sandetskaya N, Kuhlmeier D, Schmieder S, Sonntag F. Detection and identification of staphylococcus aureus using magnetic particle enhanced surface plasmon spectroscopy. Engineering in life sciences 18 (2018), 4, S. 263-268. dx.doi.org/10.1002/elsc.201700098
  • Sajfutdinow M, Jacobs WM, Reinhardt A, Schneider C, Smith DM. Direct observation and rational design of nucleation behavior in addressable self-assembly. Proceedings of the National Academy of Sciences of the United States of America : PNAS 115 (2018), 26, S. E5877-E5886. dx.doi.org/10.1073/pnas.1806010115
  • Salzmann-Manrique E, Bremm M, Huenecke S, Stech M, Orth A, Eyrich M, Schulz A, Esser R, Klingebiel T, Bader P, Herrmann E, Koehl U. Joint Modeling of Immune Reconstitution Post Haploidentical Stem Cell Transplantation in Pediatric Patients With Acute Leukemia Comparing CD34+-Selected to CD3/CD19-Depleted Grafts in a Retrospective Multicenter Study. Frontiers in Immunology 9 (2018), 1841, 12 S. dx.doi.org/10.3389/fimmu.2018.01841
  • Sauer M, Haubner C, Richter G, Ehler J, Mencke T, Mitzner S, Margraf S, Altrichter J, Doß S, Nöldge-Schomburg G v. Impaired cell viability and functionality of hepatocytes after incubation with septic plasma-results of a second prospective biosensor study. Frontiers in Immunology. 9 (2018), 1448. dx.doi.org/10.3389/fimmu.2018.01448
  • Sauer M, Richter G, Altrichter J, Wild T, Doß F, Mencke T, Ehler J, Doß S, Koch S, Schubert A, Nöldge-Schomburg G, Mitzner SR. Effects of Bioreactor-Oxygenation During Extracorporeal Granulocytes Treatment in Septic Patients. Therapeutic apheresis and dialysis 22 (2018), 4, S. 389-398. dx.doi.org/10.1111/1744-9987.12657
  • Schäffler H, Breitrück A. Clostridium difficile - from colonization to infection. Frontiers in Microbiology 9 (2018), 646. dx.doi.org/10.3389/fmicb.2018.00646
  • Schilling S, Rahfeld JU, Lues I, Lemere CA. Passive Aβ immunotherapy: Current achievements and future perspectives. Molecules 23 (2018), 5, Art. 1068, 14 S. dx.doi.org/10.3390/molecules23051068
  • Schlenzig D, Cynis H, Hartlage-Ruebsamen M, Zeitschel U, Menge K, Fothe A, Ramsbeck D, Spahn C, Wermann M, Rossner S, Buchholz M, Schilling S, Demuth HU. Dipeptidyl-Peptidase activity of Meprin _ Links N-truncation of Aβ with Glutaminyl Cyclase-Catalyzed pGlu-Aβ formation. Journal of Alzheimer’s Disease 66 (2018) 359-375. dx.doi.org/10.3233/JAD-171183
  • Schneider T, Hahn-Löbmann S, Stephan A, Schulz S, Giritch A, Naumann M, Kleinschmidt M, Tusé D, Gleba Y. Plant-made Salmonella bacteriocins salmocins for control of Salmonella pathovars. Scientific Reports 8 (2018), Art: 4078. dx.doi.org/10.1038/s41598-018-22465-9
  • Schnotalle P, Koch K, Au-Yeung RKH, Reinke S, Winter K, Loeffler M, Braumann UD, Klapper W. T-Cell clustering in neoplastic follicles of follicular lymphoma. Cancer Micro­environment 11 (2018), 2-3, 135-140. dx.doi.org/10.1007/s12307-018-0217-1
  • Schultze-Florey RE, Tischer S, Kuhlmann L, Hundsdoerfer P, Koch A, Anagnostopoulos I, Ravens S, Goudeva L, Schultze-Florey C, Koenecke C, Blasczyk R, Koehl U, Heuft HG, Prinz I, Eiz-Vesper B, Maecker-Kolhoff B. Dissecting Epstein-Barr Virus-Specific T-Cell Responses After Allogeneic EBV-Specific T-Cell Transfer for Central Nervous System Posttransplant Lymphoproliferative Disease. Frontiers in Immunology. 9 (2018), 1475. dx.doi.org/10.3389/fimmu.2018.01475
  • Schulze A, Wermann M, Demuth HU, Yoshimoto T, Ramsbeck D, Schlenzig D, Schilling S. Continuous assays for meprin alpha and beta using prolyl tripeptidyl aminopeptidase (PtP) from Porphyromonas gingivalis. Analytical biochemistry 559 (2018), S. 11-16. dx.doi.org/10.1016/j.ab.2018.08.005
  • Stadler BMR,Stadler PF. Reachability, connectivity, and proximity in chemical spaces. Match 80 (2018), Nr.3, S. 639-659. http://match.pmf.kg.ac.rs/electronic_versions/Match80/n3/match80n3_639-659.pdf
  • Sustr D, Hlaváček A, Duschl C, Volodkin D. Multi-Fractional Analysis of Molecular Diffusion in Polymer Multi­layers by FRAP: A New Simulation-Based Approach. Journal of Physical Chemistry B 122 (2018), 3, S. 1323-1333. dx.doi.org/10.1021/acs.jpcb.7b11051
  • Tan K, Jäger C, Schlenzig D, Schilling S, Buchholz M, Ramsbeck D. Tertiary-amine-based inhibitors of the astacin protease meprin α. ChemMedChem 13 (2018), 16, S. 1619-1624. dx.doi.org/10.1002/cmdc.201800300
  • Terekhov R, Selivanova I. Fractal aggregation of dihydro­quercetin after lyophilization. Journal of Pharmaceutical Innovation (2018), S. 1-8. dx.doi.org/10.1007/s12247-018-9322-4
  • Thalheim T, Quaas M, Herberg M, Braumann UD, Kerner C, Loeffler M, Aust G, Galle J. Linking stem cell function and growth pattern of intestinal organoids. Developmental Biology 433 (2018), 2, S. 254-261. dx.doi.org/10.1016/j.ydbio.2017.10.013
  • Trento C, Bernardo ME, Nagler A, Kuçi S, Bornhäuser M, Köhl U, Strunk D, Galleu A, Sanchez-Guijo F, Gaipa G, Introna M, Bukauskas A, Le Blanc K, Apperley J, Roelofs H, Van Campenhout A, Beguin Y, Kuball J, Lazzari L, Avanzini MA, Fibbe W, Chabannon C, Bonini C, Dazzi F. Manufactur­ing Mesenchymal Stromal Cells for the Treatment of Graft-versus-Host Disease: A Survey among Centers
    Affiliated with the European Society for Blood and Marrow Transplantation.     Biology of blood marrow transplantion 24 (2018), 11, S. 2365-2370. dx.doi.org/10.1016/j.bbmt.2018.07.015
  • Uhlig K, Wegener T, Hertle Y, Bookhold J, Jaeger M, Hellweg T, Fery A, Duschl C. Thermo­responsive Microgel Coatings as Versatile Functional Compounds for Novel Cell Manipulation Tools. Polymers 10 (2018), 6, Art: 656. dx.doi.org/10.3390/polym10060656
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Publikationen 2017

  • Agocs E, Kozma P, Nador J, Hamori A, Janosov M, Kalas B, Kurunczi S, Fodor B, Ehrentreich-Förster E, Fried M, Horvath R, Petrik P. Grating coupled optical waveguide interferometry combined with in situ spectroscopic ellipsometry to monitor surface processes in aqueous solutions. Applied surface science 421 (2017), Pt. B, S. 289-294. dx.doi.org/10.1016/j.apsusc.2016.07.166
  • Ahn J-S, Kim H-J, Kim YK, Lee S-S, Ahn SY, Jung SH, Yang DH, Lee JJ, Park HJ, Choi SH, Jung CW, Jang JH, Kim HJ, Moon JH, Sohn SK, Won JH, Kim SH, Szardenings M, Minden M, Hwan K, Dennis D. 5-Hydro-xymethylcytosine correlates with epigenetic regulatory mutations, but may not have prognostic value in predicting survival in normal karyotype acute myeloid leukemia. OncoTarget. 8 (2017), 5, S. 8305-8314. dx.doi.org/10.18632/oncotarget.14171
  • Al Arab M, Bernt M, Höner Zu Siederdissen C, Tout K, Stadler PF. Partially local three-way alignments and the sequence signatures of mitochondrial genome rearrangements. Algorithms for molecular biology. 12 (2017), 22, 11 S. dx.doi.org/10.1186/s13015-017-0113-0
  • Al-Arab M, Höner zu Siederdissen C, Tout KR, Sahyoun AH, Stadler PF, Bernt M. Accurate annotation of protein-coding genes in mitochondrial genomes. Molecular phylogenetics and evolution 106 (2017), S. 209-216. dx.doi.org/10.1016/j.ympev.2016.09.024
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  • Rosendahl J, Kirsten H, Hegyi E, Kovacs P, Weiss FU, Laumen H, Lichtner P, Ruffert C, Chen JM, Masson E, Beer S, Zimmer C, Seltsam K, Algül H, Bühler F, Bruno MJ, Bugert P, Burkhardt R, Cavestro GM, Cichoz-Lach H, Farré A, Frank J, Gambaro G, Gimpfl S, Grallert H, Griesmann H, Grützmann R, Hellerbrand C, Hegyi P, Hollenbach M, Iordache S, Jurkowska G, Keim V, Kiefer F, Krug S, Landt O, Leo MD, Lerch MM, Lévy P, Löffler M, Löhr M, Ludwig M, Macek M, Malats N, Malecka-Panas E, Malerba G, Mann K, Mayerle J, Mohr S, Te Morsche RHM, Motyka M, Mueller S, Müller T, Nöthen MM, Pedrazzoli S, Pereira SP, Peters A, Pfützer R, Real FX, Rebours V, Ridinger M, Rietschel M, Rösmann E, Saftoiu A, Schneider A, Schulz HU, Soranzo N, Soyka M, Simon P, Skipworth J, Stickel F, Strauch K, Stumvoll M, Testoni PA, Tönjes A, Werner L, Werner J, Wodarz N, Ziegler M, Masamune A, Mössner J, Férec C, Michl P, P H Drenth J, Witt H, Scholz M, Sahin-Tóth M; all members of the PanEuropean Working group on ACP. Genome-wide association study identifies inversion in the CTRB1-CTRB2 locus to modify risk for alcoholic and non-alcoholic chronic pancreatitis. Gut. (2017), gutjnl-2017-314454. dx.doi.org/10.1136/gutjnl-2017-314454
  • Sajfutdinow M, Uhlig K, Prager A, Schneider C, Abel B, Smith DM. Nanoscale patterning of self-assembled monolayer (SAM)-functionalised substrates with singlemolecule contact printing. Nanoscale. 39 (2017), 9, S. 15098-15106. dx.doi.org/10.1039/C7NR03696E
  • Sandetskaya N, Moos D, Pötter H, Seifert S, Jenerowicz M, Becker H, Zilch C, Kuhlmeier D. An integrated versatile lab-on-a-chip platform for the isolation and nucleic acid-based detection of pathogens. Future Science OA 3 (2017), 2, Art. FSO177, 13 S. dx.doi.org/10.4155/fsoa-2016-0088
  • Schnauß J, Glaser M, Lorenz JS, Schuldt C, Möser C, Sajfutdinow M, Haendler T, Kaes JA, Smith DM. DNA nanotubes as a versatile tool to study semiflexible polymers. Journal of Visualized Experiments JoVE. (2017), 128. dx.doi.org/10.3791/56056 
  • Schneevoigt J, Fabian C, Leovsky C, Seeger J, Bahramsoltani M. In vitro expression of the extracellular matrix components aggrecan, collagen types I and II by articular cartilage-derived chondrocytes. Anatomia, histologia, embryologia 46 (2017), 1, S. 43-50. dx.doi.org/10.1111/ahe.12230
  • Schüttler A, Reiche K, Altenburger R, Busch W. The transcriptome of the zebrafish embryo after chemical exposure: a meta-analysis. Toxicological Sciences. 157 (2017), 2, S. 291-304. dx.doi.org/10.1093/toxsci/kfx045
  • Sonnabend A, Spahn V, Stech M, Zemella A, Stein C, Kubick S. Production of G protein-coupled receptors in an insect-based cell-free system. Biotechnology and bioengineering. 114 (2017), 10, S. 2328–2338. dx.doi.org/10.1002/bit.26346
  • Soria J, Acera A, Merayo-LLoves J, Durán JA, González N, Rodriguez S, Bistolas N, Schumacher S, Bier FF, Peter H, Stöcklein W, Suárez T. Tear proteome analysis in ocular surface diseases using label-free LC-MS/MS and multiplexed-microarray biomarker validation. Scientific Reports. 7 (2017), Art. 17478, 15 S. . http://dx.doi.org/10.1038/s41598-017-17536-2
  • Spahn C, Wermann M, Eichentopf R, Hause G, Schlenzig D, Schilling S. Purification of recombinant Aβ(1-42) and pGlu-Aβ(3-42) using preparative SDS-PAGE. Electrophoresis 38 (2017), 16, S. 2042-2049. dx.doi.org/10.1002/elps.201700154
  • Stamenković S, Dučić T, Stamenković V, Kranz A, Andjus PR. Imaging of glial cell morphology, SOD1 distribution and elemental composition in the brainstem and hippocampus of the ALS hSOD1G93A rat. Neuroscience 357 (2017), S. 37-55. dx.doi.org/10.1016/j.neuroscience.2017.05.041
  • Stech M, Nikolaeva O, Thoring L, Stöcklein WFM, Wüstenhagen DA, Hust M, Dübel S, Kubick S. Cell-free synthesis of functional antibodies using a coupled in vitro transcription-Translation system based on CHO cell lysates. Scientific Reports. 7 (2017), Art. 12030, 15 S. dx.doi.org/10.1038/s41598-017-12364-w
  • Stephan A, Hahn-Löbmann S, Rosche F, Buchholz M, Giritch A, Gleba Y. Simple purification of Nicotiana benthamiana-produced recombinant colicins: High-yield recovery of purified proteins with minimum alkaloid content supports the suitability of the host for manufacturing food additives. International Journal of Molecular Sciences. 19 (2017). 1, Art. 95, 13 S. dx.doi.org/10.3390/ijms19010095
  • Strehle D, Mollenkopf P, Glaser M, Golde T, Schuldt C, Käs JA, Schnauß J. Single actin bundle rheology. Molecules. 22 (2017), 10, Art. 1804, 12 S. dx.doi.org/10.3390/molecules22101804 
  • Teren A, Kirsten H, Beutner F, Scholz M, Holdt LM, Teupser D, Gutberlet M, Thiery J, Schuler G, Eitel, I. Alteration of multiple leukocyte gene expression networks is linked with magnetic resonance markers of prognosis after acute ST-Elevation myocardial infarction. Scientific Reports 7 (2017), Art. 41705, 10 S. dx.doi.org/10.1038/srep41705
  • Thalheim T, Quaas M, Herberg M, Braumann UD, Kerner C, Loeffler M, Aust G, Galle J. Linking stem cell function and growth pattern of intestinal organoids. Developmental Biology. 433 (2018), 2, S. 254-261. dx.doi.org/10.1016/j.ydbio.2017.10.013 
  • Theuß T, Ueberham E, Lehmann J, Lindner T, Springer S. Immunogenic potential of a Salmonella Typhimurium live vaccine for pigs against monophasic Salmonella Typhimurium DT 193. BMC Vetinary Research. 13 (2017), 1, Art. 343, 8 S. dx.doi.org/10.1186/s12917-017-1271-5
  • Thoring L, Dondapati SK, Stech M. High-yield production of »difficult-to-express« proteins in a continuous exchange cell-free system based on CHO cell lysates. Scientific Reports. 7 (2017), Art, 11710. dx.doi.org/10.1038/s41598-017-12188-8
  • Valach M, Moreira S, Hoffmann S, Stadler PF, Burger G. Keeping it complicated: Mitochondrial genome plasticity across diplonemids. Scientific Reports. 7 (2017), 1, 14166, 12 S. dx.doi.org/10.1038/s41598-017-14286-z
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  • Zemella A, Grossmann S, Sachse R, Sonnabend A, Schaefer M, Kubick S. Qualifying a eukaryotic cell-free system for fluorescence based GPCR analyses. Scientific Reports 7 (2017), Art. 3740, 10 S. dx.doi.org/10.1038/s41598-017-03955-8

 

Publikationen 2016

  • Bader D, Klier DT, Hettrich C, Bier FF, Wessig P. Detecting carbohydrate–lectin interactions using a fluorescent probe based on DBD dyes. Anal. Methods. 2016 Jan 13; 8, 1235-1238: DOI dx.doi.org/10.1039/C5AY02991K
  • Bavli D, Prill S, Ezra E, Levy G, Cohen M, Vinken M, Vanfleteren J, Jaeger M, Nahmias Y. Real-time monitor­ing of metabolic function in liver-on-chip microdevices tracks the dynamics of mitochondrial dysfunction. Proceedings of the National Academy of Sciences of the United States of America : PNAS. 113 (2016), 16, S. E2231-E2240. dx.doi.org/10.1073/pnas.1522556113
  • Becker A, Eichentopf R, Sedlmeier R, Cynis H, Koch B, Stephan A, Bäuscher Ch, Kohlmann S, Hoffmann T, Kehlen A, Berg S, Freyse EJ, Osmand A, von Hörsten St, Graubner S, Demuth HU, Schilling S. IsoQC (QPCTL) knock out mice suggest differential substrate conversion by glutaminyl cyclase isoenzymes. Biological Chemistry. 397 (2016), 1, S. 45-55. dx.doi.org/10.1515/hsz-2015-0192
  • Boltze J, Wagner DC, Barthel H, Gounis M. Academic-industry collaborations in translational stroke research. Translational Stroke Research. 7 (2016), 4, S. 343-353. dx.doi.org/10.1007/s12975-016-0475-5
  • Boltze J, Ayata C. Challenges and controversies in transla­tional stroke research : An introduction. Editorial. Translational Stroke Research. 7 (2016), 5, S. 355-357. dx.doi.org/10.1007/s12975-016-0492-4
  • Boltze J, Wagner DC, Henninger N, Plesnila N, Ayata C. Phase III preclinical trials in translational stroke research : community response on framework and guidelines. Translational Stroke Research. 7 (2016), 4, S. 241-247. dx.doi.org/10.1007/s12975-016-0474-6
  • Brameshuber M, Sevcsik E, Rossboth BK, Manner C, Deigner HP, Peksel B, Péter M, Török Z, Hermetter A, Schütz GJ. Oxidized phospholipids inhibit the formation of cholesterol-dependent plasma membrane nano­platforms. Biophysical journal. 110 (2016), 1, S. 205-213. dx.doi.org/10.1016/j.bpj.2015.11.018
  • Canzler S, Stadler PF, Hertel J. U6 snRNA intron insertion occurred multiple times during fungi evolution. RNA biology. 13 (2016), 2, S. 119-127. dx.doi.org/10.1080/15476286.2015.1132139
  • Connor DO, Zantow J, Hust M, Bier FF, von Nickisch-Rosenegk M. Identification of novel immunogenic proteins of Neisseria gonorrhoeae by phage display. PLoS One. 11 (2016), Nr. 2, Art. e0148986, 24 S. dx.doi.org/10.1371/journal.pone.0148986
  • Corrales Ureña YR, Lisboa-Filho PN, Szardenings M, Gätjen L, Noeske, P LM, Rischka K. Formation and composition of adsorbates on hydro­phobic carbon surfaces from aqueous laccase-maltodextrin mixture suspension. Applied surface science. 385 (2016), S. 216-224. dx.doi.org/10.1016/j.apsusc.2016.05.097
  • Couturier J-P, Wischerhoff E, Benin R, Hettrich C, Koetz J, Sütterlin M, Tiersch B, Laschewsky A. Thermoresponsive Polymers and Inverse Opal Hydrogels for the Detection of Diols. Langmuir. 32 (2016) 4333-4345: DOI dx.doi.org/10.1021/acs.langmuir.6b00803
  • Cui LL, Kinnunen T, Boltze J, Nystedt J, Jolkkonen J. Clump­ing and viability of bone marrow derived mesen­chymal stromal cells under different preparation procedures : A flow cytometry-based in vitro study. Stem Cells International. (2016), Art. 1764938, 8 S. dx.doi.org/10.1155/2016/1764938
  • Cynis H, Frost JL, Crehan H, Lemere CA. Immunotherapy targeting pyroglutamate-3 Aβ: prospects and challenges. Molecular neurodegeneration. 11 (2016), Art. 48, 11 S. dx.doi.org/10.1186/s13024-016-0115-2
  • Domin G, Findeiß S, Wachsmuth M, Will S, Stadler PF, Mörl M. Applicability of a computational design approach for synthetic riboswitches. Nucleic Acids Research, 2016 Dec 19, pii: gkw1267. (Epub ahead of print]. dx.doi.org/10.1093/nar/gkw1267
  • Ewe A, Przybylski S, Burkhardt J, Janke A, Appelhans D, Aigner A. A novel tyrosine-modified low molecular weight polyethylenimine (P10Y) for efficient siRNA delivery in vitro and in vivo. J Control Release. 2016 May 28;230:13-25. DOI dx.doi.org/10.1016/j.jconrel.2016.03.034. Epub 2016 Apr 7.
  • Feoktistova N, Rose J, Prokopović VZ, Vikulina AS, Skirtach A, Volodkin D. Controlling the vaterite CaCO3 crystal pores : Design of tailor-made polymer based microcapsules by hard templating. Langmuir. The ACS journal of surfaces and colloids. 32 (2016), 17, S. 4229-4238. dx.doi.org/10.1021/acs.langmuir.6b00717
  • Fertey J, Bayer L, Grunwald T, Pohl A, Beckmann J, Gotzmann G, Casado JP, Schönfelder J, Rögner FH, Wetzel C, Thoma M, Bailer SM, Hiller E, Rupp S, Ulbert S. Pathogens Inactivated by Low-Energy-Electron Irradiation Maintain Antigenic Properties and Induce Protective Immune Responses. Viruses. 2016 Nov 23;8(11). pii: E319.
  • Flemmig J, Schwarz P, Bäcker I, Leichsenring A, Lange F, Arnhold J. Fast and Specific Assessment of the Halogenating Peroxidase Activity in Leukocyte-enriched Blood Samples. J. Vis. Exp. (2016), e54484, View video paper
  • Georgi V, Georgi L, Blechert M, Bergmeister M, Zwanzig M, Wüstenhagen DA, Bier FF, Jung E, Kubick S. On-chip automation of cell-free protein synthesis: new opportunities due to a novel reaction mode. Lab Chip. 2016 Jan 5;16(2):269-81. DOI dx.doi.org/10.1039/c5lc00700c.
  • Glaser M, Schnauß J, Tschirner T, Schmidt S, Moebius-Winkler M, Käs J, Smith DM. Self-assembly of hierarchically ordered structures in DNA nanotube systems. New journal of physics. 18 (2016), Art. 055001, 14 S. dx.doi.org/10.1088/1367-2630/18/5/055001
  • Habaza M, Kirschbaum M, Guernth-Marschner C, Dardikman G, Barnea I, Korenstein R, Duschl C, Shaked NT. Rapid 3D refractive-index imaging of live cells in suspension without labeling using dielectro­phoretic cell rotation. Advanced Science. (2016), 1600205, 9 S. dx.doi.org/10.1002/advs.201600205
  • Haid S, Grethe C, Bankwitz D, Grunwald T, Pietschmann T. Identification of a human respiratory syncytial virus cell entry inhibitor by using a novel lentiviral pseudotype system. Journal of virology. 90 (2016), Nr. 6, S. 3065-3073. dx.doi.org/10.1128/JVI.03074-15
  • Hamidouche Z, Rother K, Przybilla J, Krinner A, Clay D, Hopp L, Fabian C, Stolzing A, Binder H, Charbord P, Galle J. Bistable epigenetic states explain age-dependent decline in mesenchymal stem cell heterogeneity. Stem Cells. 2016 Oct 13. [Epub ahead of print]. dx.doi.org/10.1002/stem.2514
  • Heathman TR, Stolzing A, Fabian C, Rafiq QA, Coopman K, Nienow AW, Kara B, Hewitt CJ. Scalability and process transfer of mesenchymal stromal cell production from monolayer to microcarrier culture using human platelet lysate. Cytotherapy. 18 (2016), 4, S. 523-535. dx.doi.org/10.1016/j.jcyt.2016.01.007
  • Hezaveh K, Kloetgen A, Bernhart SH, Mahapatra KD, Lenze D, Richter J, Haake A, Bergmann AK, Brors B, Burkhardt B, Claviez A, Drexler HG, Eils R, Haas S, Hoffmann S, Karsch D, Klapper W, Kleinheinz K, Korbel J, Kretzmer H, Kreuz M, Küppers R, Lawerenz C, Leich E, Loeffler M, Mantovani-Loeffler L, López C, McHardy AC, Möller P, Rohde M, Rosenstiel P, Rosenwald A, Schilhabel M, Schlesner M, Scholz I, Stadler PF, Stilgenbauer S, Sungalee S, Szczepanowski M, Trümper L, Weniger MA, Siebert R, Borkhardt A, Hummel M, Hoell JI; ICGC MMML-Seq Project group. Alterations of microRNA and microRNA-regulated messenger RNA expression in germinal center B-cell lymphomas determined by integrative sequencing analysis. Haematologica. 101 (2016), 11, S. 1380-1389. dx.doi.org/10.3324/haematol.2016.143891
  • Hielscher-Michael S, Griehl C, Buchholz M, Demuth HU, Arnold N, Wessjohann LA. Natural products from microalgae with potential against Alzheimer’s disease: sulfolipids are potent glutaminyl cyclase inhibitors. Mar Drugs. 2016 Nov 2;14(11). pii: E203. dx.doi.org/10.3390/md14110203
  • Hilger N, Glaser J, Müller C, Halbich C, Müller A, Schwertassek U, Lehmann J, Ruschpler P, Lange F, Boldt A, Stahl L, Sack U, Oelkrug C, Emmrich F, Fricke S. Attenua­tion of graft-versus-host-disease in NOD scid IL-2Rγ-/- (NSG) mice by ex vivo modulation of human CD4+ T cells. Cytometry Part A. 89 (2016), 9, S. 803 - 817. dx.doi.org/10.1002/cyto.a.22930
  • Hill K, Fiorito S, Taddeo VA, Schulze A, Leonhardt M, Epifano F, Genovese S. Plumbagin, Juglone, and Boropinal as novel TRPA1 agonists. Journal of natural products. 79 (2016), 4, S .697-703. dx.doi.org/10.1021/acs.jnatprod.5b00396
  • Indrischek H, Wieseke N, Stadler PF, Prohaska SJ. The paralog-to-contig assignment problem : high quality gene models from fragmented assemblies. Algorithms for molecular biology. 11 (2016), Art. 1, 14 S. dx.doi.org/10.1186/s13015-016-0063-y
  • Jaimes Y, Naaldijk Y, Wenk K, Leovsky C, Emmrich F. Mesenchymal stem cell-derived microvesicles modulate LPS-induced inflammatory responses to microglia cells. StemCells. 2016 Nov 16. dx.doi.org/10.1002/stem.2541
  • Jorjani H, Kehr S, Jedlinski DJ, Gumienny R, Hertel J, Stadler PF, Zavolan M, Gruber AR. An updated human snoRNAome. Nucleic Acids Research. 44 (2016), 11, S. 5068-5082. dx.doi.org/10.1093/nar/gkw386
  • Jühling F, Kretzmer H, Bernhart SH, Otto C, Stadler PF, Hoffmann S. Metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data. Genome research. 26 (2016), 2, S. 256-262. dx.doi.org/10.1101/gr.196394.115
  • Kalkhof S, Schildbach S, Blumert C, Horn F, von Bergen M, Labudde D.  PIPINO: A software package to facilitate the identification of protein-protein inter­actions from affinity purification mass spectrometry data. BioMed research international. (2016), Art. 2891918, 13 S. dx.doi.org/10.1155/2016/2891918
  • Kang MG, Kim YN, Lee JH, Szardenings M, Baek HJ, Kook H, Kim HR, Shin MG. Clinicopathological implications of mitochondrial genome alterations in pediatric acute myeloid leukemia. Annals of laboratory medicine. 36 (2016), 2, S. 101-110. dx.doi.org/10.3343/alm.2016.36.2.101
  • Keller KC, Ding H, Tieu R, Sparks NR, Ehnes DD, Zur Nieden N. Wnt5a supports osteogenic lineage decisions in embryonic stem cells. Stem cells and development. 25 (2016), 13, S. 1020-1032. dx.doi.org/10.1089/scd.2015.0367
  • Kleinschmidt M, Schoenfeld R, Göttlich C, Bittner D, Metzner JE, Leplow B, Demuth HU. Characterizing aging, mild cognitive impairment, and Dementia with blood-based biomarkers and neuropsychology. Journal of Alzheimer‘s disease. 50 (2016), 1, S. 111-26. dx.doi.org/10.3233/JAD-143189
  • Kraft I, Schreiber J, Cafiero R, Metere R, Schaadt G, Brauer J, Neef NE, Müller B, Kirsten H, Wilcke A, Boltze J, Friederici AD, Skeide MA. Predicting early signs of dyslexia at a preliterate age by combining behavioral assessment with structural MRI. Neuroimage. 143 (2016), S. 378-386. dx.doi.org/10.1016/j.neuroimage.2016.09.004
  • Krakauer DC, Müller L, Prohaska SJ, Stadler PF. Design specifications for cellular regulation. Theory in biosciences. 135 (2016), 4, S. 231-240. dx.doi.org/10.1007/s12064-016-0239-5
  • Kucharík M, Hofacker IL, Stadler PF, Qin J. Pseudoknots in RNA folding landscapes. Bioinformatics. 32 (2016), 2, S. 187-194. dx.doi.org/10.1093/bioinformatics/btv572
  • Laube M, Stolzing A, Thome UH, Fabian C. Therapeutic potential of mesenchymal stem cells for pulmonary complications associated with preterm birth. The inter­national journal of biochemistry & cell biology. 74 (2016), S. 18-32. dx.doi.org/10.1016/j.biocel.2016.02.023
  • Laux EM, Knigge X, Bier FF, Wenger C, Hölzel R. Aligned immobilization of proteins using AC electric fields. Small. 12 (2016), 11, S. 1514-1520. dx.doi.org/10.1002/smll.201503052
  • Leichsenring A, Bäcker I, Furtmüller PG, Obinger C, Lange F, Flemmig J. Long-term effects of (-)-Epigallocatechin Gallate (EGCG) on Pristane-Induced Arthritis (PIA) in female dark agouti rats. PLoS one. 11 (2016), 3, Art. e0152518, 27 S. dx.doi.org/10.1371/journal.pone.0152518
  • Leontyev S, Davierwala PM, Krögh G, Feder S, Oberbach A, Bakhtiary F, Misfeld M, Borger MA, Mohr FW. Early and late outcomes of complex aortic root surgery in patients with aortic root abscesses†. Eur J Cardiothorac Surg. 2016 Feb;49(2):447-55.
  • Lipka J, Semmler-Behnke M, Wenk A, Burkhardt J, Aigner A, Kreyling W. Biokinetic datasets of PEI F25-LMW complexed and non-complexed 32P-siRNA within different lung compartments. Data in Brief 7 (2016), pp.1175-1178. DOI dx.doi.org/10.1016/j.dib.2016.03.092
  • Lipka J, Semmler-Behnke M, Wenk A, Burkhardt J, Aigner A, Kreyling W. Biokinetic studies of non-complexed siRNA versus nano-sized PEI F25-LMW/siRNA polyplexes following intratracheal instillation into mice. Int J Pharm. 2016 Mar 16;500(1-2):227-35. DOI dx.doi.org/10.1016/j.ijpharm.2016.01.038. Epub 2016 Jan 21.
  • Lipka J, Semmler-Behnke M, Wenk A, Burkhardt J, Aigner A, Kreyling W. Biokinetic datasets of PEI F25-LMW complexed and non-complexed 32P-siRNA within different lung compartments. Data in Brief. 7 (2016), S. 1175-1178. dx.doi.org/10.1016/j.dib.2016.03.092
  • Lohmann G, Stelzer J, Zuber V, Buschmann T, Margulies D, Bartels A, Scheffler K. Task-related edge density (TED) - a new method for revealing dynamic network formation in fMRI data of the human brain. PLoS One. 11 (2016), 6, Art. e0158185, 22 S. dx.doi.org/10.1371/journal.pone.0158185
  • Lorenz R, Hofacker IL, Stadler PF. RNA folding with hard and soft constraints. Algorithms for molecular biology.  11(2016), Art. 8, 13 S. dx.doi.org/10.1186/s13015-016-0070-z
  • Makert GR, Vorbrüggen S, Krautwald-Junghanns ME, Voss M, Sohn K, Buschmann T, Ulbert S. A method to identify protein antigens of Dermanyssus gallinae for the protection of birds from poultry mites. Parasitol Res. 2016 Jul;115(7):2705-13. DOI dx.doi.org/10.1007/s00436-016-5017-2
  • Meinlschmidt P, Ueberham E, Lehmann J, Schweiggert-Weisz U, Eisner P. Immunoreactivity, sensory and physicochemical properties of fermented soy protein isolate. Food chemistry. 205 (2016), S. 229-238. dx.doi.org/10.1016/j.foodchem.2016.03.016
  • Memczak H, Lauster D, Kar P, Di Lella S, Volkmer R, Knecht V, Herrmann A, Ehrentreich-Förster E, Bier FF, Stöcklein WF. Anti-hemag­glutinin antibody derived lead peptides for inhibitors of influenza virus binding. PLoS One. 11 (2016), 7, Art. e0159074, 24 S. dx.doi.org/10.1371/journal.pone.0159074
  • Menger M, Yarman A, Erdőssy J, Yildiz HB, Gyurcsányi RE, Scheller FW. MIPs and Aptamers for Recognition of Proteins in Biomimetic Sensing. Biosensors (Basel). 2016 Jul 18;6(3). pii: E35. DOI dx.doi.org/10.3390/bios6030035Article
  • Min-Gu K, Hyun-Woo C, Jun Hyung L, Yong Jun C, Hyun-Jung C, Jong-Hee S, Soon-Pal S, Szardenings M, Hye-Ran K, Myung-Geun S. Coexistence of JAK2 and CALR mutations and their clinical implications in patients with essential thrombocythemia. OncoTarget. 7 (2016), 35, S. 57036-57049. dx.doi.org/10.18632/oncotarget.10958
  • Morschheuser L, Mükusch S, Riedner M, Seitz H, Rohn S. High-performance thin-layer chromatography as a fast screening tool for phosphorylat­ed peptides. Journal of chromatography B: Analytical technologies in the biomedical and life sciences. 1008 (2016), S. 198-205. dx.doi.org/10.1016/j.jchromb.2015.11.055
  • Müller B, Wilcke A, Boulesteix AL, Brauer J, Passarge E, Boltze J, Kirsten H. Improved prediction of complex diseases by common genetic markers: State of the art and further perspectives. Human genetics. 135 (2016), 3, S. 259-272. dx.doi.org/10.1007/s00439-016-1636-z
  • Müller B, Wilcke A, Czepezauer I, Ahnert P, Boltze J,  Kirsten H, Friederici AD, Emmrich F, Brauer J, Neef N, Skeide MA, Schaadt G, Kraft I, Dörr L. Association, characterisation and meta-analysis of SNPs linked to general reading ability in a German dyslexia case-control cohort. Scientific Report. 6 (2016), Art. 27901, 11 S. dx.doi.org/10.1038/srep27901
  • Naaldijk Y, Friedrich-Stöckigt A, Sethe S, Stolzing A. Com­parison of different cooling rates for fibroblast and keratinocyte cryopreserva­tion. Journal of tissue engineer­ing and regenaritive medicine. (2016), 10, S. E354 - E364. dx.doi.org/10.1002/term.1815
  • Naaldijk Y, Jager C, Fabian C, Leovsky C, Bluher A, Rudolph L, Hinze A, Stolzing A. Effect of systemic transplantation of bone marrow-derived mesenchymal stem cells on neuropathology markers in APP/PS1. Alzheimer mice. Neuropathology and applied neurobiology. 2016 Feb 26. [Epub ahead of print]. dx.doi.org/10.1111/nan.12319
  • Nitzsche B, Barthel H, Lobsien D, Boltze J, Zeisig V, Dreyer AY. Focal cerebral ischemia by permanent middle cerebral artery occlusion in sheep: Surgical technique, clinical imaging, and histopatho­logical results. Neuromethods. 116 (2016), S. 195 - 225. dx.doi.org/10.1007/978-1-4939-3730-1_15
  • Oberbach A, Adams V, Schlichting N, Heinrich M, Kullnick Y, Lehmann S, Lehmann S, Feder S, Correia JC, Mohr FW, Völker U, Jehmlich N. Proteome profiles of HDL particles of patients with chronic heart failure are associated with immune response and also include bacteria proteins. Clin Chim Acta. 2016 Jan 30;453:114-22. DOI dx.doi.org/10.1016/j.cca.2015.12.005
  • Park SH, Zheng JH, Nguyen VH, Jiang SN, Kim DY, Szardenings M, Min JH, Hong Y, Choy HE, Min JJ. RGD peptide cell-surface display enhances the targeting and therapeutic efficacy of attenuated Salmonella-mediated cancer therapy. Theranostics. 6 (2016), 10, S. 1672-82. dx.doi.org/10.7150/thno.16135
  • Patra Bhattacharya D, Canzler S, Kehr S, Hertel J, Grosse I, Stadler PF. Phylogenetic distribution of plant snoRNA families. BMC Genomics. 17 (2016), 1, 969. dx.doi.org/10.1186/s12864-016-3301-2
  • Peng L, Yarman A, Jetzschmann KJ, Jeoung JH, Schad D, Dobbek H, Wollenberger U, Scheller FW. Molecularly imprinted electropolymer for a hexameric heme protein with direct electron transfer and peroxide electrocatalysis. Sensors. 16 (2016), 3, Art. 272, 11 S. dx.doi.org/10.3390/s16030272
  • Pösel C, Möller K, Boltze J, Wagner DC, Weise G. Isolation and flow cytometric analysis of immune cells from the ischemic mouse brain. Journal of visualized experiments : JoVE. 108 (2016), Art. e53658, 8 S. dx.doi.org/10.3791/53658
  • Prashant P, Elangovan E, Hettrich C, Möller HH, Linker T. Synthesis of 2-Thiocarbohydrates and Their Binding to Concanavalin A. J. Org. Chem. 81 (2016) 8595–8603: DOI dx.doi.org/10.1021/acs.joc.6b00987
  • Prill S, Bavli D, Levy G, Ezra E, Schmälzlin E, Jaeger MS, Schwarz M, Duschl C, Cohen M, Nahmias Y. Real-time monitor­ing of oxygen uptake in hepatic bioreactor shows CYP450-independent mitochondrial toxicity of acetaminophen and amiodarone. Archives of toxicology. 90 (2016), 5, S. 1181-1191. dx.doi.org/10.1007/s00204-015-1537-2
  • Prokopović VZ, Vikulina AS, Sustr D, Duschl C, Volodkin D. Biodegradation-resistant multilayers coated with gold Nnnoparticles : toward a tailor-made artificial extra­cellular matrix. ACS Applied materials and interfaces. 8 (2016), 37, S. 24345 - 24349. dx.doi.org/10.1021/acsami.6b10095
  • Quast RB, Ballion B, Stech M, Sonnabend A, Varga BR, Wüstenhagen DA, Kele P, Schiller SM, Kubick S. Cell-free synthesis of functional human epidermal growth factor receptor: Investigation of ligand-independent dimerization in Sf21 microsomal membranes using non-canonical amino acids. Sci Rep. 2016 Sep 27;6:34048. DOI dx.doi.org/10.1038/srep34048 Artikel
  • Quast RB, Sonnabend A, Stech M, Wüstenhagen DA, Kubick S. High-yield cell-free synthesis of human EGFR by IRES-mediated protein translation in a continuous exchange cell-free reaction format. Sci Rep. 2016 Jul 26;6:30399. DOI dx.doi.org/10.1038/srep30399Artikel
  • Rekers NV, Bajema IM, Mallat MJ, Petersen B, Anholts JD, Swings GM, van Miert PP, Kerkhoff C, Roth J, Popp D, van Groningen MC, Baeten D, Goemaere N, Kraaij MD, Zandbergen M, Heidt S, van Kooten C, de Fijter JW, Claas FH, Eikmans M. Beneficial immune effects of myeloid-related proteins in kidney transplant rejection. American journal of transplantation. 16 (2016), 5, S. 1441-1455. dx.doi.org/10.1111/ajt.13634
  • Restrepo G, Stadler PF. Assessing greenness of chemical reactions and synthesis plans through posetic landscapes. ACS sustainable chemistry & engineering. 4 (2016),  4, S. 2191-2199. dx.doi.org/10.1021/acssuschemeng.5b01649
  • Righetti F, Nuss AM, Twittenhoff C, Beele S, Urban K, Will S, Bernhart SH, Stadler PF, Dersch P, Narberhaus F. Temperature-responsive in vitro RNA structurome of Yersinia pseudotuberculosis. Proceedings of the National Academy of Sciences of the United States of America : PNAS. 113 (2016), 26, S. 7237-7242. dx.doi.org/10.1073/pnas.1523004113
  • Rohani L, Fabian C, Holland H, Naaldijk Y, Dressel R, Löffler-Wirth H, Binder H, Arnold A, Stolzing A. Generation of human induced pluripotent stem cells using non-synthetic mRNA. Stem cell research. 16 (2016), 3, S. 662-672. dx.doi.org/10.1016/j.scr.2016.03.008
  • Roshyara NR, Horn K, Kirsten H, Ahnert P, Scholz M. Comparing performance of modern genotype imputation methods in different ethnicities. Scientific Reports. 6 (2016), Art. 34386, 12 S. dx.doi.org/10.1038/srep34386
  • Sack U, Boldt A, Mallouk N, Gruber R, Krenn V, Berger-Depincé AE, Conrad K, Tarnok A, Lambert C, Reinhold D, Fricke S. Cellular analyses in the monitoring of autoimmune diseases. Autoimmunity reviews. 15 (2016), 9, S. 883-9. dx.doi.org/10.1016/j.autrev.2016.07.010
  • Sauer M, Altrichter J, Haubner C, Pertschy A, Wild T, Doß F, Mencke T, Thomsen M, Ehler J, Henschel J, Doß S, Koch S, Richter G, Nöldge-Schomburg G, Mitzner SR. Bioartificial therapy of sepsis : Changes of norepinephrine-dosage in patients and influence on dynamic and cell based liver tests during extracorporeal treatments. BioMed research international. (2016), Art. 7056492, 11 S. dx.doi.org/10.1155/2016/7056492
  • Schnauß J, Händler T, Käs JA. Semiflexible biopolymers in bundled arrangements. Polymers. 8 (2016), 8, Art. 274, 23 S. dx.doi.org/10.3390/polym8080274
  • Schuldt C, Schnauß J, Händler T, Glaser M, Lorenz J, Golde T, Käs JA, Smith DM. Tuning synthetic semiflexible networks by bending stiffness. Physical review letters. 117 (2016), 19, 5 S. dx.doi.org/10.1103/PhysRevLett.117.197801
  • Schumacher S, Seitz H. A novel immunoassay for quantitative drug abuse screening in serum. Journal of immunological methods. 436 (2016), S. 34-40. dx.doi.org/10.1016/j.jim.2016.06.004
  • Schumacher S, Seitz H. Quality control of antibodies for assay development. New Biotechnolog. 33 (2016), 5 Pt A, S. 544-50. dx.doi.org/10.1016/j.nbt.2016.02.001
  • Skeide MA, Kraft I, Müller B, Schaadt G, Neef NE, Brauer J, Wilcke A, Kirsten H, Boltze J, Friederici AD. NRSN1 associat­ed grey matter volume of the visual word form area reveals dyslexia before school. Brain. 139 (2016), 10,S. 2792-2803. dx.doi.org/10.1093/brain/aww153
  • Sombetzki M, Koslowski N, Doss S, Loebermann M, Trauner M, Reisinger EC, Sauer M. Biosensor for hepatocellular injury corresponds to experimental scoring of hepatosplenic schistosomiasis in mice. BioMed research international. (2016), Art. 1567254, 7 S. dx.doi.org/10.1155/2016/1567254
  • Sponholz C, Matthes K, Rupp D, Backaus W, Klammt S, Karailieva D, Bauschke A, Settmacher U, Kohl M, Clemens MG, Mitzner S, Bauer M, Kortgen A. Molecular adsorbent recirculating system and single-pass albumin dialysis in liver failure : A prospective, randomised crossover study. Critical care. 20(2016), Art. 2. dx.doi.org/10.1186/s13054-015-1159-3
  • Su X, Tárnok A. Cytometry advancement: A perspective from China. Cytometry A. 2016, 89 (12), S. 1049-1051. dx.doi.org/10.1002/cyto.a.23036
  • Tárnok A. Class struggle under the microscope. Cytometry A. 2016, 89 (10), S. 879-880. dx.doi.org/10.1002/cyto.a.23002
  • Tárnok A. Set Them Free! Cytometry A. 2016, 89 (11), S. 965-966. dx.doi.org/10.1002/cyto.a.23020
  • Thoring L, Wüstenhagen DA, Borowiak M, Stech M, Sonnabend A, Kubick S. Cell-Free Systems Based on CHO Cell Lysates: Optimization Strategies, Synthesis of »Difficult-to-Express« Proteins and Future Perspectives. PLoS One. 2016 Sep 29;11(9):e0163670. DOI dx.doi.org/10.1371/journal.pone.0163670 Artikel
  • Tuncel J, Haag S, Hoffmann MH, Yau AC, Hultqvist M, Olofsson P, Bäcklund J, Nandakumar KS, Weidner D, Fischer A, Leichsenring A, Lange F, Haase C, Lu S, Gulko PS, Steiner G, Holmdahl R. Animal models of rheumatoid arthritis (I): Pristane-induced arthritis in the rat. PLoS One. 11 (2016), 5, Art. e0155936, 17 S. dx.doi.org/10.1371/journal.pone.0155936
  • Uhlig K, Wegener T, He J, Zeiser M, Bookhold J, Dewald I, Godino N, Jaeger M, Hellweg T, Fery A, Duschl C. Patterned thermoresponsive microgel coatings for noninvasive processing of adherent cells. Biomacromolecules. 17 (2016), 3, S. 1110-1116. dx.doi.org/10.1021/acs.biomac.5b01728
  • Velandia-Huerto CA, Berkemer SJ, Hoffmann A, Retzlaff N, Romero Marroquín LC, Hernández-Rosales M, Stadler PF, Bermúdez-Santana CI. Orthologs, turn-over, and remolding of tRNAs in primates and fruit flies. BMC Genomics. (2016), 17:617. dx.doi.org/10.1186/s12864-016-2927-4
  • Velandia-Huerto CA, Gittenberger AA, Brown FD, Stadler PF, Bermúdez-Santana CI. Automated detection of ncRNAs in the draft genome sequence of a colonial tunicate: the carpet sea squirt Didemnum vexillum. BMC Genomics. (2016), 17:691. dx.doi.org/10.1186/s12864-016-2934-5
  • Velk N, Uhlig K, Vikulina A, Duschl C, Volodkin D. Mobility of lysozyme in poly(l-lysine)/hyaluronic acid multilayer films. Colloids and surfaces B. 147 (2016), S. 343-350. dx.doi.org/10.1016/j.colsurfb.2016.07.055
  • Vikulina AS, Anissimov YG, Singh P, Prokopović VZ, Uhlig K, Jaeger MS, von Klitzing R, Duschl C, Volodkin D. Temperature effect on the build-up of exponentially growing polyelectrolyte multilayers. An exponential-to-linear transition point. Physical chemistry, chemical physics : PCCP. 18 (2016), 11, S. 7866-7874. dx.doi.org/10.1039/c6cp00345a
  • Wagner L, Björkqvist M, Lundh SH, Wolf R, Börgel A, Schlenzig D, Ludwig HH, Rahfeld JU, Leavitt B, Demuth HU, Petersén Å, von Hörsten S. Neuropeptide Y (NPY) in cerebrospinal fluid from patients with Huntington‘s Disease: increased NPY levels and differential degradation of the NPY1-30 fragment. Journal of neurochemistry. 137 (2016), 5, S. 820-837. dx.doi.org/10.1111/jnc.13624
  • Wege AK, Schmidt M, Ueberham E, Ponnath M, Ortmann O, Brockhoff G, Lehmann J. Co-transplantation of human hematopoietic stem cells and human breast cancer cells in NSG mice: a novel approach to generate tumor cell specific human antibodies. mAbs. 6 (2016), 4, S. 968-977. dx.doi.org/10.4161/mabs.29111
  • Wilcke A, Müller B, Schaadt G, Friederici A, Emmrich F, Brauer J, Neef N, Skeide MA,  Kraft I, Czepezauer I, Bobovnikov N, Kirsten H, Boltze J. High acceptance of an early dyslexia screening test involving genetic analyses in Germany. European journal of human genetics. 24 (2016), 2, S. 178-182. dx.doi.org/10.1038/ejhg.2015.103
  • Wittke S, Baxmann S, Fahlenkamp D, Schmiedeknecht G, Kebbel K, Kießig ST. Rationales for a multi-epitope approach in an autologous renal cell cancer immunostimulant. Journal of vaccines & vaccination 7 (2016), 4, Art. 327, 5 S. dx.doi.org/10.4172/2157-7560.1000327
  • Wulff M, Baumann M, Thümmler A, Yadav JK, Heinrich L, Knüpfer U, Schlenzig D, Schierhorn A, Rahfeld JU, Horn U, Balbach J, Demuth HU, Fändrich M. Enhanced fibril fragmenta­tion of n-terminally truncated and pyroglutamyl-modified Aβ peptides. Angewandte Chemie. International edition. 55 (2016), 16, S. 5081-5084. dx.doi.org/10.1002/anie.201511099
  • Zaitseva E, Rio Martinez J del, Dondapati SK, Baaken G, Petersen S, Kubick S, Behrends JC. hERG ion channel activity measured in planar lipid bilayer arrays: Reconstitu­tion from eukaryotic cell-free expression system and cellular membrane preparations. Biophysical journal. 110 (2016), 3, Supplement 1, S. 446a. dx.doi.org/10.1016/j.bpj.2015.11.2399

Publikationen 2015

  • Barzon L, Pacenti M, Ulbert S, Palù G. Latest developments and challenges in the diagnosis of human West Nile virus infection. Expert review of anti-infective therapy. 13 (2015), 3, S. 327-42. DOI: dx.doi.org/10.1586/14787210.2015.1007044
  • Barzon L, Papa A, Lavezzo E, Franchin E, Pacenti M, Sinigaglia A, Masi G, Trevisan M, Squarzon L, Toppo S, Papadopoulou E, Nowotny N, Ulbert S, Piralla A, Rovida F, Baldanti F, Percivalle E, Palù G. Phylogenetic characterization of Central/Southern European lineage 2 West Nile virus: analysis of human outbreaks in Italy and Greece, 2013-2014. Clinical microbio­logy and infection. 21 (2015), 12, 1122.e1-1122.e10. DOI dx.doi.org/10.1016/j.cmi.2015.07.018
  • Bechlars S, Jäckel C, Diescher S, Wüstenhagen DA, Kubick S, Dieckmann R, Strauch E. Characterization of trh2 Harbouring Vibrio parahaemolyticus Strains Isolated in Germany. PLOS ONE | DOI: dx.doi.org/10.1371/journal.pone.0118559. Article
  • Betat H, Mede T, Tretbar S, Steiner L, Stadler PF, Mörl M, Prohaska SJ. The ancestor of modern Holozoa acquired the CCA-adding enzyme from Alphaproteobacteria by horizontal gene transfer. Nucleic acids research. 43 (2015), 14, 6739-46. DOI: dx.doi.org/10.1093/nar/gkv631
  • Boltze J, Arnold A, Walczak P, Jolkkonen J, Cui L, Wagner DC. The dark side of the force - constraints and complications of cell therapies for stroke. Frontiers in neurology. 6 (2015), 155. DOI dx.doi.org/10.3389/fneur.2015.00155
  • Bosserdt M, Erdőssy J, Lautner G, Witt J, Köhler K, Gajovic-Eichelmann N, Yarman A, Wittstock G, Scheller FW, Gyurcsányi RE. Microelectrospotting as a new method for electrosynthesis of surface-imprinted polymer microarrays for protein recognition. Biosensors and bioelectronics. 73 (2015), S.123-9. DOI dx.doi.org/10.1016/j.bios.2015.05.049
  • Brener O, Dunkelmann T, Gremer L, Van Groent T, Mirecka E, Kadishi I, Willuweit A, Kutzsche J, Jürgens D, Rudolph S, Tusche M, Bongen P, Pietruszka J,  Oesterhelft F, Langen KJ, Demuth HU, Janssen A, Hoyer W, Funke SA, Nagel-Steger L, Willbold D. QIAD assay for quantitating a compound‘s efficacy in elimination of toxic Aβ oligomers. Scientific Reports. 5 (2015), 13222. DOI dx.doi.org/10.1038/srep13222
  • Brödel AK, Wüstenhagen DA, Kubick S. Cell-Free Protein Synthesis Systems Derived from Cultured Mammalian Cells. Methods Mol Biol. 2015;1261:129-40. doi: dx.doi.org/10.1007/978-1-4939-2230-7_7
  • Buga AM, Scheibe J, Moller K, Ciobanu O, Posel C, Boltze J, Popa-Wagner A. Granulocyte colony-stimulating factor and bone marrow mononuclear cells for stroke treatment in the aged brain. Current neurovascular research. 12 (2015), 2, S. 155-62. DOI dx.doi.org/10.2174/1567202612666150311112550
  • Burkhardt R, Kirsten H, Beutner F, Holdt LM, Gross A, Teren A, Tönjes A, Becker S, Krohn K, Kovacs P, Stumvoll M, Teupser D, Thiery J, Ceglarek U, Scholz M. Integration of Genome-Wide SNP Data and Gene-Expression Profiles Reveals Six Novel Loci and Regulatory Mechanisms for Amino Acids and Acylcarni­tines in Whole Blood. PLoS Genetics. 11 (2015), 9:e1005510. DOI dx.doi.org/10.1371/journal.pgen.1005510
  • Couturier J-P, Sütterlin M, Laschewsky A, Hettrich C, Wischerhoff E. Inverse Opale aus responsiven Hydrogelen für die Detektion von Makromolekülen. Angew. Chem. 127 (2015) 6741-6745, DOI dx.doi.org/10.1002/ange.201500674
  • Couturier J-P, Sütterlin M, Laschewsky A, Hettrich C, Wischerhoff E. Responsive Inverse Opal Hydrogels for the Sensing of Macromolecules. Angew. Chem. Int. Ed. 54 (2015) 6641-6644, DOI dx.doi.org/10.1002/anie.201500674
  • Cui LL, Kerkelä E, Bakreen A, Nitzsche F, Andrzejewska A, Nowakowski A, Janowski M, Walczak P, Boltze J, Lukomska B, Jolkkonen J. The cerebral embolism evoked by intra-arterial delivery of allogeneic bone marrow mesenchymal stem cells in rats is related to cell dose and infusion velocity. Stem cell research and therapy. 6 (2015), 11. DOI dx.doi.org/10.1186/scrt544
  • Dammers C, Gremer L, Neudecker P, Demuth HU, Schwarten M, Willbold D. Purification and characteri­zation of recombinant N-Terminally Pyroglutamate-modified Amyloid-β variants and structural analysis by solution NMR spectroscopy. PLoS One. 10 (2015), 10, e0139710. DOI: dx.doi.org/10.1371/journal.pone.0139710
  • Dammers C, Gremer L, Reiß K, Klein AN, Neudecker P, Hartmann R, Sun N, Demuth HU,  Schwarten M, Willbold D. Structural analysis and aggregation propensity of Pyroglutamate Aβ(3-40) in Aqueous Trifluoroethanol. PLoS One. 10 (2015), 11, e0143647. DOI dx.doi.org/10.1371/journal.pone.0143647
  • Ehler J, Koball S, Sauer M, Mitzner S, Hickstein H, Benecke R, Zettl UK. Response to Therapeutic Plasma Exchange as a Rescue Treatment in Clinically Isolated Syndromes and Acute Worsening of Multiple Sclerosis: A Retrospective Analysis of 90 Patients. Plos One 2015 Aug 5;10(8):e0134583. DOI dx.doi.org/10.1371/journal.pone.0134583. eCollection 2015
  • Eisold U, Sellrie F, Schenk JA, Lenz C, Stöcklein WFM, Kumke MU. Bright or dark immune complexes of anti-TAMRA antibodies for tailored fluorescence-based bioanalysis. Analytical and bioanalytical chemistry. 407 (2015), 12, S. 3313-23. DOI dx.doi.org/10.1007/s00216-015-8538-0
  • Engelhardt J, Stadler PF. Evolution of the unspliced transcriptome. BMC Evol Biol. 15 (2015), Aug 20, 166.
  • Fernández AF, Bayón GF, Urdinguio RG, Toraño EG, García MG, Carella A, Petrus-Reurer S, Ferrero C, Martinez-Camblor P, Cubillo I, García-Castro J, Delgado-Calle J, Pérez-Campo FM, Riancho JA, Bueno C, Menéndez P, Mentink A, Mareschi K, Fabian C, Fagnani C, Medda E, Toccaceli V, Brescianini S, Moran S, Esteller M, Stolzing A, de Boer J, Nisticò L, Stazi MA, Fraga MF. H3K4me1 marks DNA regions hypomethylated during aging in human stem and differentiated cells. Genome Research. 2015 Jan;25(1):27-40. DOI dx.doi.org/10.1101/gr.169011.113
  • Feoktistova N, Stoychev G, Puretskiy N, Ionov L, Volodkin D. Porous thermo-responsive pNIPAM microgels. European polymer journal. 68 (2015), S. 65-656. DOI dx.doi.org/10.1016/j.eurpolymj.2015.03.040
  • Fischer D, Angenvoort J, Ziegler U, Fast C, Maier K, Chabierski S, Eiden M, Ulbert S, Groschup MH, Lierz M. DNA vaccines encoding the envelope protein of West Nile virus lineages 1 or 2 administered intramuscularly, via electroporation and with recombinant virus protein induce partial protection in large falcons (Falco spp.). Vet Res. 2015 Aug 17;46(1):87. DOI dx.doi.org/10.1186/s13567-015-0220-1
  • Fjeld K, Weiss FU, Lasher D, Rosendahl J, Chen JM, Johansson BB, Kirsten H, Ruffert C, Masson E, Steine SJ, Bugert P, Cnop M, Grützmann R, Mayerle J, Mössner J, Ringdal M, Schulz HU, Sendler M, Simon P, Sztromwasser P, Torsvik J, Scholz M, Tjora E, Férec C, Witt H, Lerch MM, Njølstad PR, Johansson S, Molven A. A recombined allele of the lipase gene CEL and its pseudogene CELP confers susceptibility to chronic pancreatitis. Nature genetics. 47 (2015), 5, S. 518-22. DOI dx.doi.org/10.1038/ng.3249
  • Gardner PP, Fasold M, Burge SW, Ninova M, Hertel J, Kehr S, Steeves TE, Griffiths-Jones S, Stadler PF. Conservation and losses of non-coding RNAs in avian genomes. PLoS One. 10 (2015), 3, e0121797. DOI dx.doi.org/10.1371/journal.pone.0121797
  • Gärtig C, Niemann K, Berthold J, Giel L, Leitschuh N, Boehm C, Roussak L, Vetter K, Kuhlmeier D. Development of a point-of-care-device for fast detection of periodontal pathogens. BMC Oral Health. 2015 Dec 24;15(1):165.
  • Georgi V, Georgi L, Blechert M, Bergmeister M, Zwanzig M, Wüstenhagen DA, Bier FF, Junga E, Kubick S. On-chip automation of cell-free protein synthesis: new opportunities due to a novel reaction mode. Lab Chip, 2015 Nov 11. [Epub ahead of print] DOI dx.doi.org/10.1039/C5LC00700C Article
  • Giri P, Ebert S, Braumann UD, Kremer M, Giri S, Machens HG, Bader A. Skin regeneration in deep second-degree scald injuries either by infusion pumping or topical application of recombinant human erythropoietin gel. Drug design, development and therapy. 9 (2015), S. 2565-2579. DOI dx.doi.org/10.2147/DDDT.S79425
  • Godino N, Jorde F, Lawlor D, Jaeger MS, Duschl C. Purification of microalgae from bacterial contamination using a disposable inertia-based microfluidic device. Journal of Micromechanics and Micro­engineering, 25 (2015), 8, 084002. DOI dx.doi.org/10.1088/0960-1317/25/8/084002
  • Grunwald T, Ulbert S. Improvement of DNA vaccination by adjuvants and sophisticated delivery devices: vaccine-platforms for the battle against infectious diseases. Clin Exp Vaccine Res. 2015 Jan;4(1):1-10. DOI dx.doi.org/10.7774/cevr.2015.4.1.1
  • Hahn M B, Solomun T, Wellhausen R, Herrmann S, Seitz H, Meyer S, Kunte H-J, Zeman J, Uhlig F, Smiatek J, Sturm H. The influence of the compatible solute ectoine on the local water structure: implications for the binding of the protein G5P to DNA. The Journal of Physical Chemistry, B, 119 (2015) 49, S. 15212–15220. DOI dx.doi.org/10.1021/acs.jpcb.5b09506
  • Haid S, Grethe C, Bankwitz D, Grunwald T, Pietschmann T. Identification of a human respiratory syncytial virus (hRSV) cell entry inhibitor by using a novel lentiviral pseudotype (hRSVpp) system. Journal of virology. 2015 Dec 30. [Epub ahead of print] DOI dx.doi.org/10.1128/JVI.03074-15
  • Hartlage-Rübsamen M, Waniek A, Meissner J, Morawski M, Schilling S, Jäger C, Kleinschmidt M, Cynis H, Kehlen A, Arendt T, Demuth HU, Rossner S. Isoglutaminyl cyclase contributes to CCL2-driven neuroinflammation in Alzheimer’s disease. Acta Neuropathologica 2015; 129(4): 565-583. DOI dx.doi.org/10.1007/s00401-015-1395-2
  • Heathman TR, Stolzing A, Fabian C, Rafiq QA, Coopman K, Nienow AW, Kara B, Hewitt CJ. Serum-free process development: improving the yield and consistency of human mesenchymal stromal cell production. Cytotherapy. 17 (2015), 11, S. 1524-35. DOI dx.doi.org/10.1016/j.jcyt.2015.08.002
  • Hellmuth M, Wieseke N, Lechner M, Lenhof HP, Middendorf M, Stadler PF. Phylogenomics with paralogs. Proceedings of the National Academy of Sciences of the United States of America. 112 (2015), 7, 2058-63. DOI dx.doi.org/10.1073/pnas.1412770112
  • Hertel J, Stadler PF. The expansion of animal Micro­RNA families revisited. Life (Basel). 5 (2015), 1, 905-20. DOI dx.doi.org/10.3390/life5010905
  • Hoffmann S, Stadler PF, Strimmer K. A simple data-adaptive probabilistic variant calling model. Algorithms for molecular biology. 10 ( 2015), 10. DOI dx.doi.org/10.1186/s13015-015-0037-5
  • Höner Zu Siederdissen C, Hofacker IL, Stadler PF. Product Grammars for Alignment and Folding. IEEE/ACM Trans Comput Biol Bioinform. 12 (2015), 3, 507-19.
  • Hüttl C, Hettrich C, Riedel M, Henklein P, Rawel H, Bier FF. Development of peptidyl lysine dendrons: 1,3-Dipolar cycloaddition for peptide coupling and antibody recognition. Chemical biology and drug design. 85 (2015), 5, S. 565-573. DOI dx.doi.org/10.1111/cbdd.12444
  • Janowski M, Wagner DC, Boltze J. Stem cell-based tissue replacement after stroke: factual necessity or notorious fiction? Stroke. 46 (2015), 8, S. 2354-63. DOI dx.doi.org/10.1161/STROKEAHA.114.007803
  • Jeenduang N, Porntadavity S, von Nickisch-Rosenegk M, Bier FF, Promptmas C. Two-dye based arrayed primer extension for simultaneous multigene detection in lipid metabolism. Clinica chimica acta. 442 (2015), S. 36-43. DOI dx.doi.org/10.1016/j.cca.2015.01.005
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  • Sergeeva A, Feoktistova N, Prokopovic V, Gorin D, Volodkin D. Design of Porous Alginate Hydrogels by Sacrificial CaCO3 Templates: Pore Formation Mechanism. Advanced material interfaces. 2 (2015), 18, 1500386. DOI http://dx.doi.org/10.1002/admi.201500386
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Publikationen 2014

  • Arnold C, Externbrink F, Hackermüller J, Reiche K. CEMDesigner: Design of custom expression microarrays in the post-ENCODE Era. Journal of Biotechnology. 2014 Nov 10;189:154-6. DOI dx.doi.org/10.1016/j.jbiotec.2014.09.012.
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  • Balseanu AT, Buga AM, Catalin B, Wagner DC, Boltze J, Zagrean AM, Reymann K, Schaebitz W, Popa-Wagner A. Multimodal approaches for regenerative stroke therapies: combination of granulocyte colony-stimulating factor with bone marrow mesenchymal stem cells is not superior to G-CSF alone. Frontiers in Aging Neuroscience. 2014 Jun 23;6:130.DOI dx.doi.org/10.3389/fnagi.2014.00130.
  • Barzon L, Pacenti M, Franchin E, Squarzon L, Sinigaglia A, Ulbert S, Cusinato R, Palù G. Isolation of West Nile virus from urine samples of patients with acute infection. Journal of Clinical Microbiology. 214 Sep;52(9):3411-3. DOI dx.doi.org/10.1128/JCM.01328-14.
  • Boldt A, Borte S, Fricke S, Kentouche K, Emmrich F, Borte M, Kahlenberg F, Sack U. Eight-color immunophenotyping of T-, B-, and NK-cell subpopulations for characterization of chronic immunodeficiencies. Cytometry B Clinical Cytometry. 2014 May;86(3):191-206.DOI: dx.doi.org/10.1002/cyto.b.21162.
  • Boldt A, Kahlenberg F, Fricke S, Rasche FM, Sack U. Flow cytometric phenotyping of lymphocytes in patients with systemic lupus erythematosus. Cytometry A. 2014 Jul;85(7):567-9.DOI: dx.doi.org/10.1002/cyto.a.22477
  • Boldt A, Kentouche K, Fricke S, Borte S, Kahlenberg F, Sack U. Differences in FOXP3 and CD127 expression in Treg-like cells in patients with IPEX syndrome. Clinical Immunoloy. 2014 Jul;153(1):109-11. DOI: dx.doi.org/10.1016/j.clim.2014.04.001
  • Boltze J, Ayata C, Wagner DC, Plesnila N. Preclinical phase III trials in translational stroke research: call for collective design of framework and guidelines. Stroke. 2014 Feb;45(2):357. DOI dx.doi.org/10.1161/STROKEAHA.113.004148
  • Boltze J, Lukomska B, Jolkkonen J; MEMS–IRBI consortium. Mesenchymal stromal cells in stroke: improvement of motor recovery or functional compensation? Journal of Cerebral Blood Flow and Metabolism. 2014 Aug;34(8):1420-1. DOI dx.doi.org/10.1038/jcbfm.2014.94
  • Burkhardt J, Blume M, Petit-Teixeira E, Hugo Teixeira V, Steiner A, Quente E, Wolfram G, Scholz M, Pierlot C, Migliorini P, Bombardieri S, Balsa A, Westhovens R, Barrera P, Radstake TR, Alves H, Bardin T, Prum B, Emmrich F, Cornelis F, Ahnert P, Kirsten H. Cellular adhesion gene SELP is associated with rheumatoid arthritis and displays differential allelic expression. PLoS One. 2014 Aug 22;9(8):e103872. DOI dx.doi.org/10.1371/journal.pone.0103872
  • Chabierski S, Barzon L, Papa A, Niedrig M, Bramson JL, Richner JM, Palù G, Diamond MS, Ulbert S. Distinguishing West Nile virus infection using a recombinant envelope protein with mutations in the conserved fusion-loop. BMC Infectious Diseases. 2014 May 9;14:246. DOI dx.doi.org/10.1186/1471-2334-14-246
  • Cynis H, Funkelstein L, Toneff T, Mosier C, Ziegler M, Koch B, Demuth HU, Hook V. Pyroglutamate-Amyloid-? and Glutaminyl Cyclase Are Colocalized with Amyloid-? in Secretory Vesicles and Undergo Activity-Dependent, Regulated Secretion. Neurodegenerative Diseases. 2014; 14(2):85-97. DOI dx.doi.org/10.1159/000358430
  • Danckert L, Hoppe S, Bier FF, von Nickisch-Rosenegk M. Rapid identification of novel antigens of Salmonella Enteritidis by microarray-based immunoscreening. Microchimica Acta 02/2014; • 3.43 Impact Factor.
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  • Uhlig K, Boerner HG, Wischerhoff E, Lutz JF, Jaeger MS, Laschewsky A, Duschl C. On the interaction of adherent cells with thermoresponsive polymer coatings. Polymers. (2014), 6, 1164-1177.
  • Ulbert S, Magnusson SE. Technologies for the development of West Nile virus vaccines. Future Microbiology. 2014;9(10):121-32. DOI dx.doi.org/10.2217/fmb.14.67
  • Verstrepen BE, Fagrouch Z, van Heteren M, Buitendijk H, Haaksma T, Beenhakker N, Palù G, Richner JM, Diamond MS, Bogers WM, Barzon L, Chabierski S, Ulbert S, Kondova I, Verschoor EJ. Experimental infection of rhesus macaques and common marmosets with a European strain of West Nile virus. PLoS Neglected Tropical Diseases. 2014 Apr 17;8(4):e2797. DOI dx.doi.org/10.1371/journal.pntd.0002797
  • Verstrepen BE, Oostermeijer H, Fagrouch Z, Van Heteren M, Niphuis H, Haaksma T, Kondova I, Bogers WM, De Filette M, Sanders N, Stertman L, Magnusson S, Lörincz O, Lisziewicz J, Barzon L, Palù G, Diamond MS, Chabierski S, Ulbert S, Verschoor E.J. Vaccine-induced protection of rhesus macaques against plasma viremia after intradermal infection with a European lineage 1 strain of West Nile virus. PLoS One, 9 (2014), e112568. DOI dx.doi.org/10.1371/journal.pone.0112568
  • Vochem R, Einenkel J, Horn LC, Ruschpler P. Die Bedeutung der Tumorstammzellhypothese für das Verständnis des Ovarialkarzinoms. Der Pathologe. 2014 Jul;35(4):361-70. DOI dx.doi.org/10.1007/s00292-014-1910-6
  • von Klitzing R, Volodkin DV. Competing mechanisms in polyelectrolyte multilayer formation and swelling: Polycation–polyanion pairing vs. polyelectrolyte–ion pairing. Curr. Opinion Colloid Interface Sci. (2014), in press.
  • Wagner DC, Pösel C, Schulz I, Schicht G, Boltze J, Lange F, Scheibe J, Möller K, Weise G. Allometric dose retranslation unveiled substantial immunological side effects of granulocyte colony-stimulating factor after stroke. Stroke. 2014 Feb;45(2):623-6. DOI dx.doi.org/10.1161/STROKEAHA.113.003812
  • Wege AK, Schmidt M, Ueberham E, Ponnath M, Ortmann O, Brockhoff G, Lehmann J. Co-transplantation of human hematopoietic stem cells and human breast cancer cells in NSG mice: a novel approach to generate tumor cell specific human antibodies. mAbs. 2014 Jul-Aug;6(4):968-77. DOI dx.doi.org/10.4161/mabs.29111
  • Weiler G, Schröder C, Schera F, Dobkowicz M, Kiefer S, Heidtke K R, Hänold S, Nwankwo I, Forgo N, Stanulla M, Eckert C, Graf N. p-BioSPRE – an information and communication technology framework for transnational biomaterial sharing and access. ecancer medical science 2014(8).
  • Weis S, Schlaich TC, Dehghani F, Carvalho T, Sommerer I, Fricke S, Kahlenberg F, Mössner J, Hoffmeister A. p8 Deficiency causes siderosis in spleens and lymphocyte apoptosis in acute pancreatitis. Pancreas. 2014 Nov;43(8):1277-85. DOI: dx.doi.org/10.1097/MPA.0000000000000172
  • Weise G, Lorenz M, Pösel C, Maria Riegelsberger U, Störbeck V, Kamprad M, Kranz A, Wagner DC, Boltze J. Transplantation of cryopreserved human umbilical cord blood mononuclear cells does not induce sustained recovery after experimental stroke in spontaneously hypertensive rats. Journal of Cerebral Blood Flow and Metabolism. 2014 Jan;34(1):e1-9. DOI dx.doi.org/10.1038/jcbfm.2013.185
  • Verstrepen BE, Fagrouch Z, van Heteren M, Buitendijk H, Haaksma T, Beenhakker N, Palù G, Richner JM, Diamond MS, Bogers WM, Barzon L, Chabierski S, Ulbert S, Kondova I, Verschoor EJ. Experimental infection of rhesus macaques and common marmosets with a European strain of west nile virus. PLoS Negl Trop Dis. 2014 Apr 17;8(4):e279.
  • Xu LX, Holland H, Kirsten H, Ahnert P, Krupp W, Bauer M, Schober R, Mueller W, Fritzsch D, Meixensberger J, Koschny R. Three gangliogliomas: Results of GTG-banding, SKY, genome-wide high resolution SNP-array, gene expression and review of the literature. Neuropathology. 2014 Nov 6. DOI dx.doi.org/10.1111/neup.12176
  • Zoldan K, Moellmer T, Schneider J, Fueldner C, Knauer J, Lehmann J. Increase of CD25 expression on bovine neutrophils correlates with disease severity in post-partum and early lactating dairy cows. Developmental and comparative immunology. 2014 Dec; 47(2):254-63. DOI: dx.doi.org/10.1016/j.dci.2014.08.002

Publikationen 2013

  • Arnold C, Stadler PF, Prohaska SJ. Chromatin computation: Epigenetic inheritance as a pattern reconstruction problem. Journal of theoretical biology 336 (2013), S. 61–74. DOI dx.doi.org/10.1016/j.jtbi.2013.07.012
  • Bañares R, Nevens F, Larsen FS, Jalan R, Albillos A, Dollinger M, Saliba F, Sauerbruch T, Klammt S, Ockenga J, Pares A, Wendon J, Brünnler T, Kramer L, Mathurin P, de la Mata M, Gasbarrini A, Müllhaupt B, Wilmer A, Laleman W, Eefsen M, Sen S, Zipprich A, Tenorio T, Pavesi M, Schmidt HH, Mitzner S, Williams R, Arroyo V; RELIEF study group. Extracor­poreal albumin dialysis with the molecular adsorbent re­cir­cu­lating system in acute-on-chronic liver failure: the RELIEF trial. Hepatology. 57(2013), 3, S. 1153–62. DOI dx.doi.org/10.1002/hep.26185
  • Becker A, Kohlmann S, Alexan­dru A, Jagla W, Canneva F, Bäuscher C, Cynis H, Sedlmeier R, Graubner S, Schilling S, Demuth HU, von Hörsten S. Glutaminyl cyclase-mediated toxicity of pyroglutamate-beta amyloid induces striatal neurodegeneration. BMC Neurosci. 2013 Oct 1;14:108. DOI dx.doi.org/10.1186/1471-2202-14-108
  • Bernt M, Bleidorn C, Braband A, Dambach J, Donath A, Fritzsch G, Golombek A, Hadrys H, Jühling F, Meusemann K, Middendorf M, Misof B, Perseke M, Podsiad­lowski L, Reumont B von, Schierwater B, Schlegel M, Schrödl M, Simon S, Stadler PF, Stöger I, Struck TH. A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny. Molecular phylogenetics and evolution 69 (2013), Nr. 2, S. 352–364. DOI dx.doi.org/10.1016/j.ympev.2013.05.002
  • Bernt M, Braband A, Middendorf M, Misof B, Rota-Stabelli O, Stadler PF. Bioinformatics methods for the comparative analysis of metazoan mito-­chondrial genome sequences. Molecular phylogenetics and evolution 69 (2013), 2, S. 320–327. DOI dx.doi.org/10.1016/j.ympev.2012.09.019
  • Bernt M, Braband A, Schier­water B, Stadler PF. Genetic aspects of mitochondrial genome evolution. Molecular phylo­genetics and evolution 69 (2013), Nr. 2, S. 328–338. DOI dx.doi.org/10.1016/j.ympev.2012.10.020
  • Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J, Middendorf M, Stadler PF. MITOS: improved de novo metazoan mitochondrial genome annotation. Molecular phylogenetics and evolution 69 (2013), Nr. 2, S. 313–319. DOI dx.doi.org/10.1016/j.ympev.2012.08.023
  • Biadglegne F, Tesfaye W, Anagaw B, Tessema B, Debebe T, Anagaw B, Mulu A, Sack U, Rodloff A.C. Tuberculosis lymphadenitis in Ethiopia. Japanese journal of infectious diseases : JJID 66 (2013), 4, S. 263–268.
  • Blumert C, Kalkhof S, Broche-Heidrich K, Kohajda T, von Bergen M, Horn F. Analysis of the STAT3 intercatome using in-situ biotinylation and SILAC. Journal of Proteomics. 94 (2013), S. 370–386. DOI dx.doi.org/10.1016/j.jprot.2013.08.021
  • Bodammer P, Kerkhoff C, Maletzki C, Lamprecht G. Bovine colostrum increases pore-forming claudin-2 protein expression but paradoxically not ion permeability possibly by a change of the intestinal cytokine milieu. PLoS One. 8 (2013), 5, e64210. DOI dx.doi.org/10.1371/journal.pone.0064210
  • Bodammer P, Zirzow E, Klammt S, Maletzki C, Kerkhoff C. Alteration of DSS-mediated immune cell redistribution in murine colitis by oral colostral immunoglobulin. BMC immunology. 14 (2013), e10. DOI dx.doi.org/10.1186/1471-2172-14-10
  • Boll K, Reiche K, Kasack K, Mörbt N, Kretzschmar AK, Tomm JM, Verhaegh G, Schalken J, von Bergen M, Horn F, Hackermüller J. MiR-130a, miR-203 and miR-205 jointly repress key oncogenic pathways and are downregulated in prostate carcinoma. Oncogene. 32 (2013), S. 277–285. DOI dx.doi.org/10.1038/onc.2012.55
  • Breitrück A, Sparmann G, Mitzner S, Kerkhoff C. Establishment of a novel extracorporeal bowel model to study luminal approaches to treat inflammatory bowel disease. Disease Models and Mechanisms. 6 (2013), 6, S. 1487–93. DOI dx.doi.org/10.1242/dmm.011734
  • Chabierski S, Makert GR, Kerzhner A, Barzon L, Fiebig P, Liebert UG, Papa A, Richner JM, Niedrig M, Diamond MS, Palù G, Ulbert S. Antibody responses in humans infected with newly emerging strains of West Nile Virus in Europe. PLoS One. 8 (2013), 6, e66507. DOI dx.doi.org/10.1371/journal.pone.0066507
  • Cynis H, Kehlen A, Haegele M, Hoffmann T, Heiser U, Fujii M, Shibazaki Y, Yoneyama H, Schilling S, Demuth HU. Inhibition of Glutaminyl Cyclases alleviates CCL2-mediated inflammation of non-alcoholic fatty liver disease in mice. Int J Exp Pathol. 2013 Jun; 94(3):217–25. DOI dx.doi.org/10.1111/iep.12020 Epub 2013 Apr 8.
  • Dieterich C, Stadler PF. Computational biology of RNA interactions. Wiley interdisciplinary reviews. RNA. Online resource 4 (2013), Nr. 1, S. 107–120. DOI dx.doi.org/10.1002/wrna.1147
  • Dirnagl, U, Hakim A, MacLeod M, Fisher M, Howells D, Alan SM, Steinberg G, Planas A, Boltze J, Savitz S, Iadecola C. Meairs S. A concerted appeal for international cooperation in preclinical stroke research. Stroke. 44 (2013), 6, S. 1754–1760. DOI dx.doi.org/10.1161/STROKEAHA.113.000734
  • Doose G, Alexis M, Kirsch R, Findeis S, Langenberger D, Machne R, Mörl M, Hoffmann S, Stadler PF. Mapping the RNA-Seq trash bin: Unusual transcripts in prokaryotic transcriptome sequencing data. RNA biology 10 (2013), Nr. 7, S. 1204–1210. DOI dx.doi.org/10.4161/rna.24972
  • Faust D, Kletting S, Ueberham E, Dietrich C. Aryl hydrocarbon receptor-dependent cell cycle arrest in isolated mouse oval cells. Toxicology letters. 223 (2013), 1, S. 73–80. DOI dx.doi.org/10.1016/j.toxlet.2013.08.022
  • Fricke S, Hilger N, Fricke C, Schönfelder U, Behre G, Ruschpler P, Boldt A, Oelkrug C, Sack U, Emmrich F. Prevention of graft-versus-host-disease with preserved graft-versus-leukemia-effect by ex vivo and in vivo modulation of CD4+ T-cells. Cellular and Molecular Life Sciences. 2013 Sep 26. [Epub ahead of print]
  • Frost JL, Le KX, Cynis H, Ekpo E, Kleinschmidt M, Palmour RM, Ervin FR, Snigdha S, Cotman CW, Saido TC, Vassar RJ, St George-Hyslop P, Ikezu T, Schilling S, Demuth HU, Lemere CA. Pyroglutamate-3 amyloid-beta deposition in the brains of humans, non-human primates, canines, and Alzheimer disease-like transgenic mouse models. Am J Pathol. 2013 Aug;183(2):369-81. DOI dx.doi.org/10.1016/j.ajpath.2013.05.005 Epub 2013 Jun 7.
  • Güttler BH, Cynis H, Seifert F, Ludwig HH, Porzel A, Schilling S. A quantitative analysis of spontaneous isoaspartate formation from N-terminal asparaginyl and aspartyl residues. Amino Acids. 44 (2013), 4, S. 1205–14. DOI dx.doi.org/10.1007/s00726-012-1454-0
  • Hass J, Walton E, Kirsten H, Liu J, Priebe L, Wolf C, Karbalai N, Gollub R, White T, Roessner V, Müller KU, Paus T, Smolka MN, Schumann G, IMAGEN Consor­tium, Scholz M, Cichon S, Calhoun V, Ehrlich S. A genome-wide association study suggests novel loci associated with a Schizo­phrenia-related brain-based phenotype. PLoS One. 8 (2013), 6, e64872. DOI dx.doi.org/10.1371/journal.pone.0064872
  • Hellvard A, Maresz K, Schilling S, Graubner S, Heiser U, Jonsson R, Cynis H, Demuth HU, Potempa J, Mydel P. Glutaminyl cyclases as novel targets for the treatment of septic arthritis. Journal of Infectious Diseases. 207 (2013), 5, S. 768–77. DOI dx.doi.org/10.1093/infdis/jis729
  • Hodzic M, Naaldijk Y, Stolzing A. Regulating aging in adult stem cells with microRNA. Zeitschrift für Gerontologie und Geriatrie. 46 (2013), 7, S. 629–34. DOI dx.doi.org/10.1007/s00391-013-0531-7
  • Holland H, Xu LX, Ahnert P, Kirsten H, Koschny R, Bauer M, Schober R, Meixensberger J, Krupp W. Comprehensive high-resolution genomic profiling and cytogenetics of two pediatric and one adult medulloblastoma. Pathology – research and practice. 209 (2013), 9, S. 541–7. DOI dx.doi.org/10.1016/j.prp.2013.06.001
  • Hubicka J, Jost J, Long Y, Stadler PF, Yang L. Relations between graphs. Ars mathematica contemporanea 6 (2013), Nr. 2, S. 323–350.
  • Jiang SN, Park SH, Lee HJ, Zheng JH, Kim HS, Bom HS, Hong Y, Szardenings M, Shin MG, Kim SC, Ntziachristos V, Choy HE, Min JJ. Engineering of bacteria for the visualiza­tion of targeted delivery of a cytolytic anticancer agent. Molecular Therapy. 21 (2013), 11, S. 1985–95. DOI dx.doi.org/10.1038/mt.2013.183
  • Kehlen A, Haegele M, Menge K, Gans K, Immel UD, Hoang-Vu C, Klonisch T, Demuth HU. Role of glutaminyl cyclases in thyroid carcinomas. Endocr Relat Cancer. 2013 Feb 18;20(1):79-90. DOI dx.doi.org/10.1530/ERC-12-0053 Print 2013 Feb.
  • Kolenko P, Koch B, Rahfeld JU, Schilling S, Demuth HU, Stubbs MT. Structure of glutaminyl cyclase from Drosophila melanogaster in space group I4. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Apr 1;69 (Pt 4): 358-61. DOI dx.doi.org/10.1107/S1744309113005575 Epub 2013 Mar 28.
  • Langenberger D, Cakir MV, Hoffmann S, Stadler PF. Dicer-processed small RNAs: Rules and exceptions. Journal of experimental zoology. Part B, Molecular and developmental evolution 320B (2013), Nr. 1, S. 35–46. DOI dx.doi.org/10.1002/jez.b.22481
  • Lechner M, Marz M, Ihling C, Sinz A, Stadler PF, Krauss V. The correlation of genome size and DNA methylation rate in metazoans. Theory in Biosciences 132 (2013), Nr. 1, S. 47–60. DOI dx.doi.org/10.1007/s12064-012-0167-y
  • Lehmann J, Stadler PF, Krauss V. Near intron pairs and the metazoan tree. Molecular phylogenetics and evolution 66 (2013), Nr. 3, S. 811–823. DOI dx.doi.org/10.1016/j.ympev.2012.11.012
  • Lipfert J, Ödemis V, Wagner DC, Boltze J, Engele J. CXCR4 and CXCR7 form a functional receptor unit for SDF-1/CXCL12 in primary rodent microglia. Neuropathology and applied neurobiology. 39 (2013), 6, S. 667–80. DOI dx.doi.org/10.1111/nan.12015
  • Lison H, Happel MF, Schneider F, Baldauf K, Kerbstat S, Seelbinder B, Schneeberg J, Zappe M, Goldschmidt J, Budinger E, Schröder UH, Ohl FW, Schilling S, Demuth HU, Scheich H, Reymann KG, Rönicke R. Disrupted cross-laminar cortical processing in β amyloid pathology precedes cell death. Neurobiol Dis. 2014 Mar;63:62-73. DOI dx.doi.org/10.1016/j.nbd.2013.11.014 Epub 2013 Nov 27.
  • Lobsien D, Dreyer AY, Stroh A, Boltze J, Hoffmann KT. Imaging of VSOP labeled stem cells in agarose phantoms with susceptibility weighted and T2* weighted MR Imaging at 3T: determination of the detection limit. PLoS One. 8 (2013), 5, e62644. DOI dx.doi.org/10.1371/journal.pone.0062644
  • Mitzner S. Stellenwert der MARS-Dialyse beim Acute-on-chronic-Leberversagen. Zeitschrift für Gastroenterologie. 51 (2013), 10, S. 1193–4. DOI dx.doi.org/10.1055/s-0033-1350351
  • Mitzner SR, Gloger M, Henschel J, Koball S. Improvement of hemodynamic and inflammatory parameters by combined hemoadsorption and hemodiafiltration in septic shock: a case report. Blood Purification. 35 (2013),4, S. 314–5. DOI dx.doi.org/10.1159/000351206
  • Müller SA, Findeiß S, Pernitzsch SR, Wissenbach DK, Stadler PF, Hofacker IL, Bergen M. von, Kalkhof S. Identification of new protein coding sequences and signal peptidase cleavage sites of Helicobacter pylori strain 26695 by proteogenomics. Journal of Proteomics 86 (2013), S. 27–42. DOI dx.doi.org/10.1016/j.jprot.2013.04.036
  • Pachernegg S, Joshi I, Muth-Köhne E, Pahl S, Münster Y, Terhag J, Karus M, Werner M, Ma-Högemeier ZL, Körber C, Grunwald T, Faissner A, Wiese S, Hollmann M. Undifferentiated embryonic stem cells express ionotropic glutamate receptor mRNAs. Frontiers in Neuroscience. 7 (2013), 241, 12 S. DOI dx.doi.org/10.3389/fncel.2013.00241
  • Pönisch W, Moll B, Bourgeois M, Andrea M, Schliwa T, Heyn S, Schmalfeld M, Edelmann T, Becker C, Hoffmann FA, Schwarzer A, Kreibich U, Egert M, Stiegler R, Krahl R, Remane Y, Bachmann A, Lindner T, Weid­hase L, Petros S, Fricke S, Vucinic V, Al Ali H, Niederwieser D. Bendamustine and prednisone in combination with bortezomib (BPV) in the treatment of patients with relapsed or refractory multiple myeloma and light chain-induced renal failure. Journal of Cancer Research and Clinical Oncology. 139 (2013), 11, S. 1937–46. DOI dx.doi.org/10.1007/s00432-013-1513-2
  • Ramsbeck D., Buchholz M., Koch B., Böhme S., Hoffmann T., Demuth H-U, Heiser U. Structure-activity relationships of benzimidazole-based glutaminyl cyclase inhibitors featuring a heteroaryl scaffold. Journal of Medicinal Chemistry.56 (2013), 17, S. 6613–25. DOI dx.doi.org/10.1021/jm4001709
  • Sabarinathan R, Tafer H, Seemann SE, Hofacker IL, Stadler PF, Gorodkin J. RNAsnp: Efficient detection of local RNA secondary structure changes induced by SNPs. Human mutation 34 (2013), Nr. 4, S. 546–556. DOI dx.doi.org/10.1002/humu.22273
  • Sabarinathan R, Tafer H, Seemann SE, Hofacker IL, Stadler PF, Gorodkin J. The RNAsnp web server: predicting SNP effects on local RNA secondary structure. Nucleic Acids Research 41 (2013), Nr. W1, S. W475–W479. DOI dx.doi.org/10.1093/nar/gkt291
  • Sack U, Barnett D, Demirel GY, Fossat C, Fricke S, Kafassi N, Nebe T, Psarra K, Steinmann J, Lambert C. Accreditation of flow cytometry in Europe. Cytometry B Clinical Cytometry. 84 B (2013), 3, S. 135–42. DOI dx.doi.org/10.1002/cyto.b.21079
  • Sauer M, Altrichter J, Mencke T, Klöhr S, Thomsen M, Kreutzer HJ, Nöldge-Schomburg G, Mitzner SR. Role of different replacement fluids during extracorporeal treatment in a pig model of sepsis. Therapeutic Apheresis and Dialysis. 17 (2013), 1, S. 84–92. DOI dx.doi.org/10.1111/j.1744-9987.2012.01103.x
  • Schreiber R, Luong N, Fan Z, Kuzyk A, Nickels PC, Zhang T, Smith DM, Yurke B, Kuang W, Govorov AO, Liedl T. Chiral plasmonic DNA nano­structures with switchable circular dichroism. Nature Communations. 4 (2013), 2948. DOI dx.doi.org/10.1038/ncomms3948
  • Smith D, Schüller V, Engst C, Rädler J, Liedl T. Nucleic acid nanostructures for biomedical applications. Nanomedicine. 8 (2013), 1, S. 105–21. DOI dx.doi.org/10.2217/nnm.12.184
  • Stolzing A, Haendeler J. Aging-mechanisms, models, and translation. Zeitschrift für Gerontologie und Geriatrie. 46 (2013), 7, S. 612. DOI dx.doi.org/10.1007/s00391-013-0528-2
  • Sun N, Hartmann R, Lecher J, Stoldt M, Funke SA, Gremer L, Ludwig HH, Demuth HU, Kleinschmidt M, Willbold D. Structural analysis of the pyroglutamate-modified isoform of the Alzheimer‘s disease-related amyloid-β using NMR spectroscopy. J Pept Sci. 2012 Nov;18(11):691-5. DOI dx.doi.org/10.1002/psc.2456 Epub 2012 Sep 24
  • Tessema B, Beer J, Merker M, Emmrich F, Sack U, Rodloff AC, Niemann S. Molecular epidemiology and trans­mission dynamics of Mycobacterium tuberculosis in Northwest Ethiopia: new phylogenetic lineages found in Northwest Ethiopia. BMC Infectious Diseases. 13 (2013), 131. DOI dx.doi.org/10.1186/1471-2334-13-131
  • Wachsmuth M, Findeiß S, Weissheimer N, Stadler PF, Mörl M. De novo design of a synthetic riboswitch that regulates transcription termination. Nucleic Acids Research 41 (2013), Nr. 4, S. 2541–2551. DOI dx.doi.org/10.1093/nar/gks1330
  • Wagner DC, Scheibe J, Glocke I, Weise G, Deten A, Boltze J, Kranz A. Object-based analysis of astroglial reaction and astrocyte subtype morphology after ischemic brain injury. Acta Neurobio­logiae Experimentals. 73 (2013), 1, S. 79–87.
  • Will S, Siebauer MF, Heyne S, Engelhardt J, Stadler PF, Reiche K, Backofen R. LocARNAscan: incorporating thermodynamic stability in sequence and structure-based RNA homology search. Algorithms for Molecular Biology. 8 (2013), 1, 14. DOI dx.doi.org/10.1186/1748-7188-8-14

Publikationen 2012

  • Arnold A, Naaldijk YM, Fabian C, Wirth H, Binder H, Nikkhah G, Armstrong L, Stolzing A. Reprogramming of Human Huntington Fibroblasts Using mRNA. ISRN Cell Biology, Volume 2012 (2012), Article ID 124878, 12 pages. DOI dx.doi.org/10.5402/2012/124878 Article
  • Averill MM, Kerkhoff C, Bornfeldt KE. S100A8 and S100A9 in cardiovascular biology and disease. Arterioscler Thromb Vasc Biol. 32 (2012), 2, S. 223-9. DOI dx.doi.org/10.1161/ATVBAHA.111.236927
  • Bañares R, Nevens F, Larsen FS, Jalan R, Albillos A, Dollinger M, Saliba F, Sauerbruch T, Klammt S, Ockenga J, Pares A, Wendon J, Brünnler T, Kramer L, Mathurin P, Mata MD, Gasbarrini A, Müllhaupt B, Wilmer A, Laleman W, Eefsen M, Sen S, Zipprich A, Tenorio T, Pavesi M, Schmidt HH, Mitzner S, Williams R, Arroyo V. Extracorporeal albumin dialysis with the molecular adsorbent recirculating system in acute-on-chronic liver failure: The RELIEF trial. Hepatology. 2012. DOI dx.doi.org/10.1002/hep.26185 [Epub ahead of print]
  • Beer S, Gomez T, Dallinger D, Momber I, Marnay C, Stadler M, Lai J. An economic analysis of used electric vehicle batteries integrated into commercial building microgrids. IEEE transactions on smart grid 3 (2012), 1, S.517-525. DOI dx.doi.org/10.1109/TSG.2011.2163091
  • Boltze J, Kleinschnitz C, Reymann KG, Reiser G, Wagner DC, Kranz A, Michalski D; the meeting contributors. Neurovascular pathophysiology in cerebral ischemia, dementia and the ageing brain - current trends in basic, translational and clinical research. Exp Transl Stroke Med. 4 (2012), 1:14. DOI dx.doi.org/10.1186/2040-7378-4-14
  • Boltze J, Reich DM, Hau S, Reymann KG, Strassburger M, Lobsien D, Wagner DC, Kamprad M, Stahl T. Assessment of neuroprotective effects of human umbilical cord blood mononuclear cell subpopulations in vitro and in vivo. Cell Transplant. 21 (2012), 4, S. 723-737. DOI dx.doi.org/10.3727/096368911X586783
  • Boltze J, Schmidt UR, Reich DM, Kranz A, Reymann KG, Strassburger M, Lobsien D, Wagner DC, Förschler A, Schäbitz WR. Determination of the therapeutic time window for human umbilical cord blood mononuclear cell transplantation following experimental stroke in rats. Cell Transplant. 21 (2012), 6, S. 1199-211. DOI dx.doi.org/10.3727/096368911X589609
  • Burkhardt J, Kirsten H, Holland H, Krupp W, Ligges C, Quente E, Boltze J, Ahnert P, Wilcke A. Association of rs2069459 in the CDK5 gene with dyslexia in a German cohort. Psychiatric Genetics. 22 (2012), 6, S. 307-308. DOI dx.doi.org/10.1097/YPG.0b013e328353aeae
  • Burkhardt J, Kirsten H, Wolfram G, Quente E, Ahnert P. Differential allelic expression of IL13 and CSF2 genes associated with asthma. Genetics and molecular biology, 35(2012), 3, S. 567-574. DOI dx.doi.org/10.1590/S1415-47572012005000055
  • Colley H, McArthur SL, Stolzing A, Scutt A. Culture on fibrin matrices maintains the colony-forming capacity and osteoblastic differentiation of mesenchymal stem cells. Biomed Mater. 7 (2012), 4:045015. DOI dx.doi.org/10.1088/1748-6041/7/4/045015
  • De Filette M, Ulbert S, Diamond M, Sanders NN. Recent progress in West Nile virus diagnosis and vaccination. Vet Res.43 (2012), 1, S. 16. DOI dx.doi.org/10.1186/1297-9716-43-16
  • Engelhardt J, Stadler PF. Hidden treasures in unspliced EST data. Theory in Biosciences 131 (2012), 1, S.49-57. DOI dx.doi.org/10.1007/s12064-012-0151-6
  • Fricke S, Fricke C, Oelkrug C, Blatz R, Schönfelder U, Niederwieser D, Hilger N, Ruhnke M, Rodloff AC. A real-time PCR for the detection and characterisation of Aspergillus species. Mycoses. 55 (2012), 5, S. 416-25. DOI dx.doi.org/10.1111/j.1439-0507.2011.02161.x
  • Fricke S, Rothe K, Hilger N, Ackermann M, Oelkrug C, Fricke C, Schönfelder U, Niederwieser D, Emmrich F, Sack U. Allogeneic bone marrow grafts with high levels of CD4(+) CD25(+) FoxP3(+) T cells can lead to engraftment failure. Cytometry A. 81 (2012), 6, S. 476-88. DOI dx.doi.org/10.1002/cyto.a.22061
  • Fueldner C, Mittag A, Knauer J, Biskop M, Hepp P, Scholz R, Wagner U, Sack U, Emmrich F, Tárnok A, Lehmann J. Identification and evaluation of novel synovial tissue biomarkers in rheumatoid arthritis by laser scanning cytometry. Arthritis Res Ther. 14 (2012), 1:R8. DOI dx.doi.org/10.1186/ar3682
  • Fuellen G, Dengjel J, Hoeflich A, Hoeijemakers J, Kestler HA, Kowald A, Priebe S, Rebholz-Schuhmann D, Schmeck B, Schmitz U, Stolzing A, Sühnel J, Wuttke D, Vera J. Systems Biology and Bioinformatics in Aging Research: A Workshop Report. Rejuvenation Res. 15 (2012), 6, S. 631 -641. DOI dx.doi.org/10.1089/rej.2012.1360
  • Hellmuth M, Ostermeier L, Stadler PF. A survey on hypergraph products. Mathematics in Computer Science 6 (2012), 1, S.1-32. DOI dx.doi.org/10.1007/s11786-012-0109-6
  • Hellmuth M, Ostermeier L, Stadler PF. Diagonalized Cartesian products of S-prime graphs are S-prime. Discrete mathematics 312 (2012), 1, S.74-80. DOI dx.doi.org/10.1016/j.disc.2011.03.033
  • Hertel J, Bartschat S, Wintsche A, Otto C, Stadler PF. Evolution of the let-7 microRNA Family. RNA biology 9 (2012), 3, S.231-241. DOI dx.doi.org/10.4161/rna.9.3.18974
  • Hinz D, Bauer M, Röder S, Olek S, Huehn J, Sack U, Borte M, Simon JC, Lehmann I, Herberth G; for the LINA study group. Cord blood Tregs with stable FOXP3 expression are influenced by prenatal environment and associated with atopic dermatitis at the age of one year. Allergy. 67 (2012), 3, S. 380 - 389. DOI dx.doi.org/10.1111/j.1398-9995.2011.02767.x
  • Hinze A, Stolzing A. Microglia differentiation using a culture system for the expansion of mice non-adherent bone marrow stem cells. J Inflamm (Lond). 9 (2012), 1:12. DOI dx.doi.org/10.1186/1476-9255-9-12
  • Hofacker IL, Reidys CM, Stadler PF. Symmetric circular matchings and RNA folding. Discrete mathematics 312 (2012), 1, S.100-112. DOI dx.doi.org/10.1016/j.disc.2011.06.004
  • Holland H, Ahnert P, Koschny R, Kirsten H, Bauer M, Schober R, Meixensberger J, Fritzsch D, Krupp W. Detection of novel genomic aberrations in anaplastic astrocytomas by GTG-banding, SKY, locusspecific FISH, and high density SNP-array. Pathology, research and practice, 208 (2012), 6, S. 325-330. DOI dx.doi.org/10.1016/j.prp.2012.03.010
  • Johnson AA, Akman K, Calimport SR, Wuttke D, Stolzing A, de Magalhães JP. The role of DNA methylation in aging, rejuvenation, and age-related disease. Rejuvenation Res. 15 (2012), 5, S. 483-94. DOI dx.doi.org/10.1089/rej.2012.1324
  • Jühling F, Pütz J, Bernt M, Donath A, Middendorf M, Florentz C, Stadler PF. Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements. Nucleic Acids Research 40 (2012), 7, S.2833-2845. DOI dx.doi.org/10.1093/nar/gkr1131
  • Jühling F, Putz J, Florentz C, Stadler PF. Armless mitochondrial tRNAs in enoplea (nematoda). RNA biology 9 (2012), 9, S.1161-1166. DOI dx.doi.org/10.4161/rna.21630
  • Kerkhoff C, Voss A, Scholzen TE, Averill MM, Zänker KS, Bornfeldt KE. Novel insights into the role of S100A8/A9 in skin biology. Exp Dermatol. 21 (2012), 11, S. 822 - 6. DOI dx.doi.org/10.1111/j.1600-0625.2012.01571.x
  • Kielstein JT, Beutel G, Fleig S, Steinhoff J, Meyer TN, Hafer C, Kuhlmann U, Bramstedt J, Panzer U, Vischedyk M, Busch V, Ries W, Mitzner S, Mees S, Stracke S, Nürnberger J, Gerke P, Wiesner M, Sucke B, Abu-Tair M, Kribben A, Klause N, Schindler R, Merkel F, Schnatter S, Dorresteijn EM, Samuelsson O, Brunkhorst R; Collaborators of the DGfN STEC-HUS registry. Best supportive care and therapeutic plasma exchange with or without eculizumab in Shiga-toxin-producing E. coli O104:H4 induced haemolytic-uraemic syndrome: an analysis of the German STEC-HUS registry. Nephrol Dial Transplant. 27 (2012), 10, S. 3807-15. DOI dx.doi.org/10.1093/ndt/gfs394
  • Kirsten H, Wilcke A, Ligges C, Boltze J, Ahnert P. Association study of a functional genetic variant in KIAA0319 in German dyslexics. Psychiatric Genetics. 22 (2012), 4, S. 216-217. DOI dx.doi.org/10.1097/YPG.0b013e32834c0c97
  • Klammt S, Wojak HJ, Mitzner A, Koball S, Rychly J, Reisinger EC, Mitzner S. Albumin-binding capacity (ABiC) is reduced in patients with chronic kidney disease along with an accumulation of protein-bound uraemic toxins. Nephrol Dial Transplant. 27 (2012), 6, S. 2377-83. DOI dx.doi.org/10.1093/ndt/gfr616
  • Klemm K, Mehta A, Stadler PF. Landscape encodings enhance optimization. PLoS one. Online journal 7 (2012), 4, Art. E34780. DOI dx.doi.org/10.1371/journal.pone.0034780
  • Klionsky DJ and 1269 others. Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy 8 (2012), 4, S. 445 - 544. DOI dx.doi.org/10.4161/auto.19496
  • Koch H, Graneist C, Emmrich F, Till H, Metzger R, Aupperle H, Schierle K, Sack U, Boldt A. Xenogenic esophagus scaffolds fixed with several agents: comparative in vivo study of rejection and inflammation. J Biomed Biotechnol. 2012; 2012:948320. DOI dx.doi.org/10.1155/2012/948320
  • Kuhlmeier D, Sandetskaya N, Allelein S. Application of nanotechnology in miniaturized systems and its use in medical and food analysis. Recent Pat Food Nutr Agric. 4 (2012), 3, S. 187-99. DOI dx.doi.org/10.2174/2212798411204030187
  • Lange F, Sack U. Gelenkentzündungen : Modellsysteme für die Arthritisforschung. GIT Spezial BIOforum 1/2012, S. 28-30. GIT Labor-Fachzeitschrift 56 (2012), 6, S. 459-461. Artikel
  • Langenberger D, Pundhir S, Ekstrom CT, Stadler PF, Hoffmann S, Gorodkin J. deepBlockAlign: A tool for aligning RNA-seq profiles of read block patterns. Bioinformatics 28 (2012), 1, S.17-24. DOI dx.doi.org/10.1093/bioinformatics/btr598
  • Leichsenring A, Lange F. Tiermodelle in der präklinischen Forschung. GIT Labor-Fachzeitschrift 56 (2012), 12, S. 848–849. Artikel
  • Maletzki C, Bodammer P, Breitrück A, Kerkhoff C. S100 proteins as diagnostic and prognostic markers in colorectal and hepatocellular carcinoma. Hepat Mon. 2012, 12 (10 HCC):e7240. DOI dx.doi.org/10.5812/hepatmon.7240
  • Michalski D, Heindl M, Kacza J, Laignel F, Küppers-Tiedt L, Schneider D, Grosche J, Boltze J, Löhr M, Hobohm C, Härtig W. Spatio-temporal course of macrophage-like cell accumulation after experimental embolic stroke depending on treatment with tissue plasminogen activator and its combination with hyperbaric oxygenation. Eur J Histochem. 2012, 56(2):e14. DOI dx.doi.org/10.4081/ejh.2012.14
  • Möller K, Stahl T, Boltze J, Wagner DC. Isolation of inflammatory cells from rat brain tissue after stroke. Exp Transl Stroke Med. 4 (2012), 1:20. DOI dx.doi.org/10.1186/2040-7378-4-20
  • Naaldijk Y, Staude M, Fedorova V, Stolzing A. Effect of different freezing rates during cryopreservation of rat mesenchymal stem cells using combinations of hydroxyethyl starch and dimethylsulfoxide. BMC Biotechnol. (2012) 12:49. DOI dx.doi.org/10.1186/1472-6750-12-49
  • Ostermeier L, Hellmuth M, Stadler PF. The Cartesian product of hypergraphs. Journal of Graph Theory 70 (2012), 2, S.180-196. DOI dx.doi.org/10.1002/jgt.20609
  • Otto C, Reiche K, Hackermüller J. Detection of differentially expressed segments in tiling array data. In: Bioinformatics 28 (2012), 11, S.1471-1479. DOI dx.doi.org/10.1093/bioinformatics/bts142
  • Otto C, Stadler PF, Hoffmann S. Fast and sensitive mapping of bisulfite-treated sequencing data. Bioinformatics 28 (2012), 13, S.1698-1704. DOI dx.doi.org/10.1093/bioinformatics/bts254
  • Pohler P, Lehmann J, Veneruso V, Tomm J, v. Bergen M, Lambrecht B, Kohn B, Weingart C, Müller TH, Seltsam A. Evaluation of the tolerability and immunogenicity of ultraviolet C-irradiated autologous platelets in a dog model. Transfusion. 52 (2012), 11, S. 2414-26. DOI dx.doi.org/10.1111/j.1537-2995.2012.03583.x
  • Polchow B, Kebbel K, Schmiedeknecht G, Reichardt A, Henrich W, Hetzer R, Lueders C. Cryopreservation of human vascular umbilical cord cells under good manufacturing practice conditions for future cell banks. J Transl Med. 2012; 10:98. DOI dx.doi.org/10.1186/1479-5876-10-98
  • Pösel C, Möller K, Fröhlich W, Schulz I, Boltze J, Wagner DC. Density gradient centrifugation compromises bone marrow mononuclear cell yield. PLoS One. 7 (2012), 12:e50293. DOI dx.doi.org/10.1371/journal.pone.0050293
  • Sauer M, Altrichter J, Mencke T, Klöhr S, Thomsen M, Kreutzer HJ, Nöldge-Schomburg G, Mitzner SR. Plasma separation by centrifugation and subsequent plasma filtration: impact on survival in a pig model of sepsis. Ther Apher Dial. 16 (2012), 3, S. 205-12. DOI dx.doi.org/10.1111/j.1744-9987.2011.01055.x
  • Sauer M, Haubner C, Mencke T, Nöldge-Schomburg G, Mitzner S, Altrichter J, Stange J. Impaired cell functions of hepatocytes incubated with plasma of septic patients. Inflamm Res. 61 (2012), 6, S. 609-16. DOI dx.doi.org/10.1007/s00011-012-0451-9
  • Schmidtke C, Findeiß S, Sharma CM, Kuhfuß J, Hoffmann S, Vogel J, Stadler PF, Bonas U. Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions. Nucleic Acids Research 40 (2012), 5, S.2020-2031. DOI dx.doi.org/10.1093/nar/gkr904
  • Scholbach J, Schulz A, Westphal F, Egger D, Wege AK, Patties I, Köberle M, Sack U, Lange F. Comparison of hematopoietic stem cells derived from fresh and cryopreserved whole cord blood in the generation of humanized mice. PLoS One. 7 (2012), 10:e46772. DOI dx.doi.org/10.1371/journal.pone.0046772
  • Stolzing A, Bauer E, Scutt A. Suspension cultures of bonemarrow-derived mesenchymal stem cells: effects of donor age and glucose level. Stem Cells Dev. 21 (2012), 14, S. 2718-23. DOI dx.doi.org/10.1089/scd.2011.0406
  • Stolzing A, Naaldijk Y, Fedorova V, Sethe S. Hydroxyethylstarch in cryopreservation - mechanisms, benefits and problems. Transfus Apher Sci. 46 (2012), 2, S. 137-47. DOI dx.doi.org/10.1016/j.transci.2012.01.007
  • Terpolilli NA, Kim SW, Thal SC, Kataoka H, Zeisig V, Nitzsche B, Klaesner B, Zhu C, Schwarzmaier S, Meissner L, Mamrak U, Engel DC, Drzezga A, Patel RP, Blomgren K, Barthel H, Boltze J, Kuebler WM, Plesnila N. Inhalation of nitric oxide prevents ischemic brain damage in experimental stroke by selective dilatation of collateral arterioles. Circ Res. 110 (2012), 5, S. 727-38. DOI dx.doi.org/10.1161/CIRCRESAHA.111.253419
  • Tessema B, Beer J, Emmrich F, Sack U, Rodloff AC. Analysis of gene mutations associated with isoniazid, rifampicin and ethambutol resistance among Mycobacterium tuberculosis isolates from Ethiopia. BMC Infect Dis. 12 (2012) :37. DOi dx.doi.org/10.1186/1471-2334-12-37
  • Tessema B, Beer J, Emmrich F, Sack U, Rodloff AC. First- and second-line anti-tuberculosis drug resistance in Northwest Ethiopia. Int J Tuberc Lung Dis. 16 (2012), 6 S. 805-11. DOI dx.doi.org/10.5588/ijtld.11.0522
  • Tippmann SC, Ivanek R, Gaidatzis D, Scholer A, Hoerner L, Nimwegen E. van, Stadler PF, Stadler MB, Schubeler D. Chromatin measurements reveal contributions of synthesis and decay to steady-state mRNA levels. Molecular systems biology 8 (2012), Art.593. DOI dx.doi.org/10.1038/msb.2012.23
  • Voss A, Bode G, Kerkhoff C. Double-stranded RNA induces IL-8 and MCP-1 gene expression via TLR3 in HaCaTkeratinocytes. Inflamm Allergy Drug Targets. 11 (2012), 5, S. 397-405.
  • Voss A, Gescher K, Hensel A, Nacken W, Zänker KS, Kerkhoff C. Double-stranded RNA induces S100 gene expression by a cycloheximide-sensitive factor. FEBS Lett. 586 (2012), 2, S. 196-203. DOI dx.doi.org/10.1016/j.febslet.2011.12.022
  • Wagner DC, Bojko M, Peters M, Lorenz M, Voigt C, Kaminski A, Hasenclever D, Scholz M, Kranz A, Weise G, Boltze J. Impact of age on the efficacy of bone marrow mononuclear cell transplantation in experimental stroke. Exp Transl Stroke Med. 24(2012), 1:17. DOI dx.doi.org/10.1186/2040-7378-4-17
  • Wagner DC, Deten A, Härtig W, Boltze J, Kranz A. Changes in T2 relaxation time after stroke reflect clearing processes. Neuroimage.61 (2012), 4, S. 780-5. DOi dx.doi.org/10.1016/j.neuroimage.2012.04.023
  • Weise G, Stoll G. Magnetic resonance imaging of blood brain/nerve barrier dysfunction and leukocyte infiltration: closely related or discordant? Front Neurol. 2012; 3:178. DOi dx.doi.org/10.3389/fneur.2012.00178
  • Wilcke A, Ligges C, Burkhardt J, Alexander M, Wolf C, Quente E, Ahnert P, Hoffmann P, Becker A, Müller-Myhsok B, Cichon S, Boltze J, Kirsten H. Imaging genetics of FOXP2 in dyslexia. European Journal of Human Genetics, 20 (2012), 2, S. 224-229. DOI dx.doi.org/10.1038/ejhg.2011.160
  • Will S, Joshi T, Hofacker IL, Stadler PF, Backofen R. LocARNA-P: Accurate boundary prediction and improved detection of structural RNAs. RNA 18 (2012), 5, S.900-914. DOI dx.doi.org/10.1261/rna.029041.111
  • Wuttig D, Zastrow S, Füssel S, Toma MI, Meinhardt M, Kalman K, Junker K, Sanjmyatav J, Boll K, Hackermüller J, Rolle A, Grimm M-O, Wirth MP. CD31, EDNRB and TSPAN7 are promising prognostic markers in clear-cell renal cell carcinoma revealed by genome-wide expression analyses of primary tumors and metastases. International journal of cancer 131 (2012), 5, S.E693-E704. DOI dx.doi.org/10.1002/ijc.27419

Publikationen 2011

  • Boltze J, Kranz A, Wagner DC, Reymann K, Reiser G, Hess DC. Recent advances in basic and translational stroke research. Expert Rev Neurother. 2011 Feb;11(2):199-202.
  • Boltze J, Nitzsche B, Geiger KD, Schoon HA. Histopathological investigation of different MCAO modalities and impact of autologous bone marrow mononuclear cell administration in an Ovine stroke model. Translational Stroke Research 2 (2011), 3, S.279-293. DOI dx.doi.org/10.1007/s12975-011-0101-5
  • Boltze J, Reich DM, Hau S, Reymann KG, Strassburger M, Lobsien D, Wagner DC, Kamprad M, Stahl T. Assessment of neuroprotective effects of human umbilical cord blood mononuclear cell subpopulations in vitro and in vivo. Cell Transplant. 2011 Sep 16. DOI dx.doi.org/10.3727/096368911X586783 [Epub ahead of print]
  • Boltze J, Schmidt UR, Reich DM, Kranz A, Reymann KG, Strassburger M, Lobsien D, Wagner DC, Förschler A, Schäbitz WR. Determination of the therapeutic time window for human umbilical cord blood mononuclear cell transplantation following experimental stroke in rats. Cell Transplant. 2011 Dec 13. DOI dx.doi.org/10.3727/096368911X589609 [Epub ahead of print]
  • Clark MB, Amaral PP, Schlesinger FJ, Dinger ME, Taft RJ, Rinn JL, Ponting CP, Stadler PF, Morris KV, Morillon A, Rozowsky JS, Gerstein MB, Wahlestedt C, Hayashizaki Y, Carninci P, Gingeras TR, Mattick JS. The reality of pervasive transcription. PLoS Biol. 9 (2011), 7, e1000625; discussion e1001102. DOI dx.doi.org/10.1371/journal.pbio.1000625
  • Efimenko A, Starostina E, Kalinina N, Stolzing A. (2011) Angiogenic properties of aged adipose derived mesenchymal stem cells after hypoxic conditioning. J Transl Med. Jan 18;9(1):10. DOI dx.doi.org/10.1186/1479-5876-9-10 Article
  • Eggenhofer F, Tafer H, Stadler PF, Hofacker IL. RNApredator : fast accessibility-based prediction of sRNA targets. Nucleic Acids Res. 39 (2011), Supl. 2, W149-54. DOI dx.doi.org/10.1093/nar/gkr467
  • Fangmann J, Kathrin Al-Ali H, Sack U, Kamprad M, Tautenhahn HM, Faber S, Hauss J, Niederwieser D, Lindner T, Bachmann A. Kidney transplant from the same donor without maintenance immunosuppression after previous hematopoietic stem cell transplant. Am J Transplant. 11 (2011), 1, S. 156 - 62. DOI dx.doi.org/10.1111/j.1600-6143.2010.03352.x
  • Fasold M, Langenberger D, Binder H, Stadler PF, Hoffmann S. DARIO: a ncRNA detection and analysis tool for next-generation sequencing experiments. Nucleic Acids Res. 39 (2011), Supl. 2, S. W112-7. DOI dx.doi.org/10.1093/nar/gkr357
  • Findeiss S, Engelhardt J, Prohaska SJ, Stadler PF. Protein-coding structured RNAs: A computational survey of conserved RNA secondary structures overlapping coding regions in drosophilids. Biochimie. 93 (2011), 11, S. 2019-23. DOI dx.doi.org/10.1016/j.biochi.2011.07.023
  • Findeiss S, Langenberger D, Stadler PF, Hoffmann S. Traces of post-transcriptional RNA modifications in deep sequencing data. Biol Chem. 2392 (2011), 4, S. 305-13. DOI dx.doi.org/10.1515/bc.2011.043
  • Fricke S, Fricke C, Oelkrug C, Blatz R, Schönfelder U, Niederwieser D, Hilger N, Ruhnke M, Rodloff AC. A real-time PCR for the detection and characterisation of Aspergillus species. Mycoses. 2011 Dec 11. DOI dx.doi.org/10.1111/j.1439-0507.2011.02161.x [Epub ahead of print]
  • Grey D, Sack U, Scholz M, Knaack H, Fricke S, Oppel C, Luderer D, Fangmann J, Emmrich F, Kamprad M. Increased CD64 expression on polymorphonuclear neutrophils indicates infectious complications following solid organ transplantation. Cytometry A. 79 (2011), 6, S. 446 - 60. DOI dx.doi.org/10.1002/cyto.a.21049
  • Hinze A, Stolzing A. (2011) Differentiation of mouse bone marrow derived stem cells toward microglia. BMC Cell Biology. Aug 19;12(1):35. DOI dx.doi.org/10.1186/1471-2121-12-35 Article
  • Holland H, Livrea M, Ahnert P, Koschny R, Kirsten H, Meixensberger J, Bauer M, Schober R, Fritzsch D, Krupp W. Intracranial hemangiopericytoma: Case study with cytogenetics and genome wide SNP-A analysis. Pathol Res Pract. 2011 Feb 7. [Epub ahead of print]
  • Jühling F, Pütz J, Bernt M, Donath A, Middendorf M, Florentz C, Stadler PF. Improved systematic tRNA gene annotation allows new insights into the evolution of mitochondrial tRNA structures and into the mechanisms of mitochondrial genome rearrangements. Nucleic Acids Res. 2011 Dec 1. [Epub ahead of print] DOI dx.doi.org/10.1093/nar/gkr1131
  • Kehr S, Bartschat S, Stadler PF, Tafer H. PLEXY : efficient target prediction for box C/D snoRNAs. Bioinformatics. 27 (2011), 2, S. 279-80. DOI dx.doi.org/10.1093/bioinformatics/btq642
  • Kim M, Garant KA, Zur Nieden N, Alain T, Loken SD, Urbanski SJ, Forsyth PA, Rancourt D, Lee PW, Johnston RN. Attenuated reovirus displays oncolysis with reduced host toxicity. The British journal of cancer. 104 (2011), 2, S. 290 - 299. DOI dx.doi.org/10.1038/sj.bjc.6606053
  • Kirsten H, Wilcke A, Ligges C, Boltze J, Ahnert P. Association study of a functional genetic variant in KIAA0319 in German dyslexics. Psychiatr Genet. 2011 Sep 20. DOI dx.doi.org/10.1097/YPG.0b013e32834c0c97 [Epub ahead of print].
  • Knauer J, Krupka I, Fueldner C, Lehmann J, Straubinger RK. Evaluation of the preventive capacities of a topically applied azithromycin formulation against Lyme borreliosis in a murine model. J Antimicrob Chemother. 66 (2011), 12, S. 2814 - 2822. DOI dx.doi.org/10.1093/jac/dkr371
  • Krakauer DC, Collins JP, Erwin D, Flack JC, Fontana W, Laubichler MD, Prohaska SJ, West GB, Stadler PF. The challenges and scope of theoretical biology. J Theor Biol. 276 (2011), 1, S. 269-76. DOI dx.doi.org/10.1016/j.jtbi.2011.01.051
  • Lechner M, Findeiss S, Steiner L, Marz M, Stadler PF, Prohaska SJ. Proteinortho : detection of (co-)orthologs in large-scale analysis. BMC Bioinformatics. 12 (2011), 124, 9 S. DOI dx.doi.org/10.1186/1471-2105-12-124
  • Marz M, Stadler PF. RNA interactions. Adv Exp Med Biol. 722 (2011), S. 20-38. DOI dx.doi.org/10.1007/978-1-4614-0332-6_2
  • Menzel P, Stadler PF, Gorodkin J. MaxAlike : maximum likelihood-based sequence reconstruction with application to improved primer design for unknown sequences. Bioinformatics. 27 (2011), 3, S. 317-25. DOI dx.doi.org/10.1093/bioinformatics/btq651
  • Michalski D, Pelz J, Weise C, Kacza J, Boltze J, Grosche J, Kamprad M, Schneider D, Hobohm C, Härtig W. Early outcome and blood-brain barrier integrity after co-administered thrombolysis and hyperbaric oxygenation in experimental stroke. Exp Transl Stroke Med. 3 (2011), 5, 9 S. DOI dx.doi.org/10.1186/2040-7378-3-5
  • Mocker K, Holland H, Ahnert P, Schober R, Bauer M, Kirsten H, Koschny R, Meixensberger J, Krupp W. Multiple meningioma with different grades of malignancy: case report with genetic analysis applying single-nucleotide polymorphism array and classical cytogenetics. Pathol Res Pract. 2011 Jan 15;207(1):67-72.
  • Oschatz C, Maas C, Lecher B, Jansen T, Björkqvist J, Tradler T, Sedlmeier R, Burfeind P, Cichon S, Hammerschmidt S, Müller-Esterl W, Wuillemin WA, Nilsson G, Renné T. Mast cells increase vascular permeability by heparin-initiated bradykinin formation in vivo. Immunity. 34 (2011), 2, S. 258-68. DOI dx.doi.org/10.1016/j.immuni.2011.02.008
  • Otto C, Hoffmann S, Gorodkin J, Stadler PF. Fast local fragment chaining using sum-of-pair gap costs. Algorithms Mol Biol. 6 (2011), 4, 8 S. DOI dx.doi.org/10.1186/1748-7188-6-4
  • Paulsen K, Tauber S, Timm J, Goelz N, Dumrese C, Stolzing A, Hass R, Ullrich O. (2011) The cannabinoid receptors agonist WIN55212-2 inhibits macrophageal differentiation and alters expression and phosphorylation of cell cycle control proteins. Cell Commun Signal. Dec 28;9(1):33.
  • Perseke M, Hetmank J, Bernt M, Stadler PF, Schlegel M, Bernhard D. The enigmatic mitochondrial genome of Rhabdopleura compacta (Pterobranchia) reveals insights into selection of an efficient tRNA system and supports monophyly of Ambulacraria. BMC Evol Biol. 11 (2011), 134, 12 S. DOI dx.doi.org/10.1186/1471-2148-11-134
  • Raincrow JD, Dewar K, Stocsits C, Prohaska SJ, Amemiya CT, Stadler PF, Chiu CH. Hox clusters of the bichir (Actinopterygii, Polypterus senegalus) highlight unique patterns of sequence evolution in gnathostome phylogeny. J Exp Zool B Mol Dev Evol. 16 (2011), 6, S. 451-64. DOI dx.doi.org/10.1002/jez.b.21420
  • Reidys CM, Huang FW, Andersen JE, Penner RC, Stadler PF, Nebel ME. Topology and prediction of RNA pseudoknots. Bioinformatics. 27 (2011), 8, S. 1076-85. DOI dx.doi.org/10.1093/bioinformatics/btr090
  • Riegelsberger UM, Deten A, Pösel C, Zille M, Kranz A, Boltze J, Wagner DC. Intravenous human umbilical cord blood transplantation for stroke: impact on infarct volume and caspase-3-dependent cell death in spontaneously hypertensive rats. Exp Neurol. 2011 Jan;227(1):218-23. Epub 2010 Nov 16.
  • Roesler U, Szabo I, Matthies C, Albrecht K, Leffler M, Scherer K, Nöckler K, Lehmann J, Methner U, Hensel A, Truyen U. Comparing validation of four ELISA-systems for detection of Salmonella derby- and Salmonella infantis-infected pigs. Berl Munch Tierarztl Wochenschr. 124 (2011), 7-8, S. 265-71. DOI dx.doi.org/10.2376/0005-9366-124-265
  • Rose D, Hiller M, Schutt K, Hackermüller J, Backofen R, Stadler PF. Computational discovery of human coding and non-coding transcripts with conserved splice sites. Bioinformatics. 27 (2011), 14, S. 1894-900. DOI dx.doi.org/10.1093/bioinformatics/btr314
  • Rupf S, Idlibi AN, Marrawi FA, Hannig M, Schubert A, von Mueller L, Spitzer W, Holtmann H, Lehmann A, Rueppell A, Schindler A. Removing biofilms from microstructured titanium ex vivo: a novel approach using atmospheric plasma technology. PLoS One.6 (2011), 10, e25893, 9 S. DOI dx.doi.org/10.1371/journal.pone.0025893
  • Schneeweiss A, Chabierski S, Salomo M, Delaroque N, Al-Robaiy S, Grunwald T, Bürki K, Liebert UG, Ulbert S. A DNA vaccine encoding the E protein of West Nile Virus is protective and can be boosted by recombinant domain DIII. Vaccine, 29 (2011), S. 6352-6357.
  • Schubert K, Polte T, Bönisch U, Schader S, Holtappels R, Hildebrandt G, Lehmann J, Simon JC, Anderegg U, Saalbach A. Thy-1 (CD90) regulates the extravasation of leukocytes during inflammation. Eur J Immunol. 41 (2011), 3, S. 645 - 656. DOI dx.doi.org/10.1002/eji.201041117
  • Skardelly M, Gaber K, Burdack S, Scheidt F, Hilbig H, Boltze J, Förschler A, Schwarz S, Schwarz J, Meixensberger J, Schuhmann MU. Long-term benefit of human fetal neuronal progenitor cell transplantation in a clinically adapted model after traumatic brain injury. J Neurotrauma. 28 (2011), 3, S. 401-14. DOI dx.doi.org/10.1089/neu.2010.1526
  • Smith DM, Schüller V, Forthmann C, Schreiber R, Tinnefeld P, Liedl T. A structurally variable hinged tetrahedron framework from DNA origami. J. Nuc. Acid., 2011. DOI dx.doi.org/10.4061/2011/360954
  • Stolzing A, Colley H, Scutt A. (2011) Effect of age and diabetes on the response of mesenchymal progenitor cells to fibrin matrices. Int J Biomater. 2011; 378034. Epub 2011 Dec 13. DOI dx.doi.org/10.1155/2011/378034 Article
  • Tafer H, Amman F, Eggenhofer F, Stadler PF, Hofacker IL. Fast accessibility-based prediction of RNA-RNA interactions. Bioinformatics. 27 (2011), 14, S. 1934-40. DOI dx.doi.org/10.1093/bioinformatics/btr281
  • Terpolilli NA, Kim SW, Thal SC, Kataoka H, Zeisig V, Nitzsche B, Klaesner B, Zhu C, Schwarzmaier S, Meissner L, Mamrak U, Engel DC, Drzezga A, Patel RP, Blomgren K, Barthel H, Boltze J, Kuebler WM, Plesnila N. Inhalation of nitric oxide prevents Ischemic brain damage in experimental stroke by selective dilatation of Collateral Arterioles. Circ Res. 2011 Dec 29. DOI dx.doi.org/10.1161/CIRCRESAHA.111.253419 [Epub ahead of print]
  • Tessema B, Beer J, Emmrich F, Sack U, Rodloff AC. Rate of recovery of Mycobacterium tuberculosis from frozen acid-fast-bacillus smear-positive sputum samples subjected to long-term storage in Northwest Ethiopia. J Clin Microbiol. 49 (2011), 7, S. 2557 - 61. DOI dx.doi.org/10.1128/JCM.00059-11
  • Tramontano A, Donath A, Bernhart SH, Reiche K, Böhmdorfer G, Stadler PF, Bachmair A. Deletion analysis of the 3' long terminal repeat sequence of plant retrotransposon Tto1 identifies 125 base pairs redundancy as sufficient for first strand transfer. Virology. 412 (2011), 1, 75 - 82. DOI dx.doi.org/10.1016/j.virol.2010.12.059
  • Ulbert S. West Nile Virus: The Complex Biology of an Emerging Pathogen. Intervirology, 54 (2011), S. 171-184.
  • Ullrich A, Rohrschneider M, Scheuermann G, Stadler PF, Flamm C. In silico evolution of early metabolism. Artif Life. 17 (2011), 2, S. 87-108. DOI dx.doi.org/10.1162/artl_a_00021
  • Wagner DC, Riegelsberger UM, Michalk S, Härtig W, Kranz A, Boltze J. Cleaved caspase-3 expression after experimental stroke exhibits different phenotypes and is predominantly non-apoptotic. Brain Res. 2011 Mar 24;1381:237-42. Epub 2011 Jan 20.
  • Washietl S, Findeiss S, Müller SA, Kalkhof S, von Bergen M, Hofacker IL, Stadler PF, Goldman N. RNAcode: robust discrimination of coding and noncoding regions in comparative sequence data. RNA. 17 (2011), 4, S. 578-94. DOI dx.doi.org/10.1261/rna.2536111
  • Wilcke A, Ligges C, Burkhardt J, Alexander M, Wolf C, Quente E, Ahnert P, Hoffmann P, Becker A, Müller-Myhsok B, Cichon S, Boltze J, Kirsten H. Imaging genetics of FOXP2 in dyslexia. Eur J Hum Genet. 20 (2012), 2, S. 224-9. DOI dx.doi.org/10.1038/ejhg.2011.160
  • Wuttig D, Zastrow S, Füssel S, Toma MI, Meinhardt M, Kalman K, Junker K, Sanjmyatav J, Boll K, Hackermüller J, Rolle A, Grimm MO, Wirth MP. CD31, EDNRB and TSPAN7 are promising prognostic markers in clear-cell renal cell carcinoma revealed by genome-wide expression analyses of primary tumors and metastases. Int J Cancer. 2011 Dec 31. DOI dx.doi.org/10.1002/ijc.27419 [Epub ahead of print]
  • zu Siederdissen CH, Bernhart SH, Stadler PF, Hofacker IL. A folding algorithm for extended RNA secondary structures. Bioinformatics. 27 (2011), 13, S. i129-36. DOI dx.doi.org/10.1093/bioinformatics/btr220

Publikationen 2010

  • Al-Robaiy S, Dihazi H, Kacza J, Seeger J, Schiller J, Huster D, Knauer J, Straubinger RK. Metamorphosis of Borrelia burgdorferi organisms – RNA, lipid and protein composition in context with the spirochetes’ shape. Journal of Basic Microbiology. 50 (2010), Sup. 1, S. 5–17.
  • Amemiya CT, Powers TP, Prohaska SJ, Grimwood J, Schmutz J, Dickson M, Miyake T, Schoenborn MA, Myers R, Ruddle FH, Stadler PF. Complete HOX cluster characterization of the coelacanth provides further evidence for slow evolution of its genome. Proceedings of the National Academy of Sciences of the United States of America. 107 (2010), 8, S. 3622–3627.
  • Arnold C, Stadler PF. Polynomial algorithms for the Maximal Pairing Problem: efficient phylogenetic targeting on arbitrary trees. Algorithms for molecular biology. 5 (2010), 25, 10 S. DOI dx.doi.org/10.1186/1748-7188-5-25
  • Bermudez-Santana C, Attolini CSO, Kirsten T, Engelhardt J, Prohaska SJ, Steigele S, Stadler PF. Genomic organization of eukaryotic tRNAs. BMC genomics. 11 (2010), 270, 14 S. DOI dx.doi.org/10.1186/1471-2164-11-270
  • Boria I, Gruber A, Tanzer A, Bernhart SH, Lorenz R, Müller MM, Hofacker IL, Stadler PF. Nematode sbRNAs: homologs of vertebrate Y RNAs. Journal of molecular evolution. 70 (2010), 4, S. 346–358.
  • Chung NP, Breun SK, Bashirova A, Baumann JG, Martin TD, Karamchandani JM, Rausch JW, Le Grice SF, Wu L, Carrington M, Kewalramani VN. HIV-1 transmission by dendritic cell-specific ICAM-3-grabbing nonintegrin (DC-SIGN) is regulated by determinants in the carbo­hydrate recognition domain that are absent in liver/lymph node-SIGN (L-SIGN). J Biol Chem. 285 (2010), 3, S. 2100–2112.
  • Dienelt A, zur Nieden NI. Hyperglycemia impairs skeletogenesis from embryonic stem cells by affecting osteoblast and osteoclast differentiation. Stem Cells Dev. 2010 Nov 30 [Epub ahead of print]. DOI dx.doi.org/10.1089/scd.2010.025
  • Fasold M, Stadler PF, Binder H. G-stack modulated probe intensities on expression arrays – sequence corrections and signal calibration. BMC bioinformatics. 11 (2010), 207, 24 S. DOI dx.doi.org/10.1186/1471-2105-11-207
  • Findeiß S, Schmidtke C, Stadler PF, Bonas U. A novel family of plasmid-transferred anti-sense ncRNAs. RNA biology. 7 (2010), 2, S. 120–124. DOI dx.doi.org/10.4161/rna.7.2.11184
  • Fricke S, Fricke C, Oelkrug C, Hilger N, Schönfelder U, Kamprad M, Lehmann J, Boltze J, Emmrich F, Sack U. Characterization of murine non-adherent bone marrow cells leading to recovery of endogenous hematopoiesis. Cell Mol Life Sci. 67 (2010), 23, S. 4095–4106.
  • Fricke S, Fricke C, Schimmelpfennig C, Oelkrug C, Schönfelder U, Blatz R, Zilch C, Faber S, Hilger N, Ruhnke M, Rodloff AC. A real-time PCR assay for the differentiation of Candida species. J Appl Microbiol. 109 (2010), 4, S 1150–1158.
  • Gessner C, Rechner B, Hammerschmidt S, Kuhn H, Hoheisel G, Sack U, Ruschpler P, Wirtz H. Angiogenic markers in breath condensate identify non-small cell lung cancer. Lung Cancer, 68 (2010), 2, S. 177–184.
  • Hemdan NY, Birkenmeier G, Wichmann G, Abu El-Saad A, Krieger T, Conrad K, Sack U. Interleukin-17-producing T helper cells in autoimmunity. Autoimmunity Reviews, 9 (2010), 11, S. 785–792.
  • Hinz D, Simon JC, Maier-Simon C, Milkova L, Röder S, Sack U, Borte M, Lehmann I, Herberth G. Reduced maternal regulatory T cell numbers and increased T helper type 2 cytokine production are associated with elevated levels of immunoglobulin E in cord blood. Clinical and Experimental Allergy. 40 (2010), 3, S. 419–426.
  • Hofacker I, Flamm C, Heine C, Wolfinger MT, Scheuermann G, Stadler PF. BarMap: RNA folding on dynamic energy landscapes, RNA. 16 (2010), 7, S. 1308–1316.
  • Huang FWD, Qin J, Reidys CM, Stadler PF. Target prediction and a statistical sampling algorithm for RNA-RNA interaction. Bioinformatics. 26 (2010), 2, S. 175–181.
  • Kranz A, Wagner DC, Kamprad M, Scholz M, Schmidt UR, Nitzsche F, Aberman Z, Emmrich F, Riegelsberger UM, Boltze J. Transplantation of placenta-derived mesenchymal stromal cells upon experimental stroke in rats. Brain Res, 1315 (2010), S. 128–36.
  • Lehmann J, Stadler PF, Eisenhardt C, Krauss V. Some novel intron positions in conserved Drosophila genes are caused by intron sliding or tandem duplication. BMC evolutionary biology. 10 (2010), 156, 15 S. DOI dx.doi.org/10.1186/1471-2148-10-156
  • Lenz D, Barten MJ, Hiller S, Tarnok A, Sack U. Regenerative and predictive medicine of cardiovascular disease: the 9th Leipziger Workshop and the 2nd International Workshop on slide based cytometry. Cytom Part A, 64 (2005), 2, S. 110-114.
  • Lindner I. et al. alpha 2-Macroglobulin Inhibits the Malignant Properties of Astrocytoma Cells by Impeding beta-Catenin Signaling. Cancer Research, v. 70 (2010), no. 1, p. 277–287.
  • Marz M, Vanzo N, Stadler PF. Temperature-dependent structural variability of RNAs: spliced leader RNAs and their evolutionary history. Journal of bioinformatics and computational biology. 8 (2010), 1, S. 1–17.
  • Mühle A, Mühle C, Amann K, Dötsch J, Nüsken KD, Boltze J, Schneider H. No juvenile arterial hypertension in sheep multiples despite reduced nephron numbers. Pediatr Nephrol. 25 (2010), 9, S. 1653–61.
  • Müller M, Lutter D, Püschel AW. Persistence of the cell-cycle checkpoint kinase Wee1 in SadA- and SadB-deficient neurons disrupts neuronal polarity. J Cell Sci. 123 (2010), Pt 2, S. 286–94.
  • Perseke M, Bernhard D, Fritzsch G, Brümmer F, Stadler PF, Schlegel M. Mitochondrial genome evolution in Ophiuroidea, Echinoidea, and Holothuroidea: insights in phylogenetic relationships of Echinodermata. Molecular phylogenetics and evolution. 56 (2010), 1, S. 201–211.
  • Prohaska SJ, Stadler PF, Krakauer DC. Innovation in gene regulation: the case of chromatin computation. Journal of theoretical biology. 265 (2010), 1, S. 27–44.
  • Riester M, Stadler PF, Klemm K. Reconstruction of pedigrees in clonal plant populations. Theoretical population biology. 78 (2010), 2, S. 109–117.
  • Rupf S, Lehmann A, Hannig M, Schafer B, Schubert A, Feldmann U, Schindler A. Killing of adherent microbes by a non-thermal atmospheric plasma jet. J Med Microbiol. 59 (2010), Pt 2, S. 206–12.
  • Schneeweiss A, Buyens K, Giese M, Sanders N, Ulbert S. Synergistic effects between natural histone mixtures and polyethylenimine in non-viral gene delivery in vitro. Int J Pharm. 400 (2010), 1–2, S. 86–95.
  • Sharma C, Hoffmann S, Darfeuille F, Reignier J, Findeiß S, Sittka A, Chabas S, Reiche K, Hackermüller J, Reinhardt R, Stadler PF, Vogel J. The primary transcriptome of the major human pathogen Helicobacter pylori. Nature. 464 (2010), 7286, S. 250–255.
  • Stadler BM, Stadler PF. Combinatorial vector fields and the valley structure of fitness landscapes. Journal of mathematical biology. 61 (2010), 6, S. 877–898.
  • Stolzing A, Sellers D, Llewelyn O, Scutt A. Diabetes induced changes in rat mesenchymal stem cells. Cells Tissues Organs. 191 (2010), 6, S. 453–65.
  • Tafer H, Kehr S, Hertel J, Hofacker IL, Stadler PF. RNAsnoop : efficient target prediction for H/ACA snoRNAs. Bioinformatics. 26 (2010), 5, S. 610–616.
  • Taiani JT, Krawetz RJ, zur Nieden NI, Wu YE, Kallos MS, Matyas JR, Rancourt DE. Reduced Differentiation Efficiency of Murine Embryonic Stem Cells in Stirred Suspension Bioreactors. Stem Cell Dev. (2010), 7, S. 989–998.
  • Tessema B, Biadglegne F, Mulu A, Getachew A, Emmrich F, Sack U. Magnitude and determinants of nonadherence and nonreadiness to highly active antiretroviral therapy among people living with HIV/AIDS in Northwest Ethiopia: a cross-sectional study. AIDS research and therapy, 7 (2010), 2, 8 S. DOI dx.doi.org/10.1186/1742-6405-7-2
  • Tessema B, Yismaw G, Kassu A, Amsalu A, Mulu A, Emmrich F, Sack U. Seroprevalence of HIV, HBV, HCV and syphilis infections among blood donors at Gondar University Teaching Hospital, Northwest Ethiopia: declining trends over a period of five years. BMC Infectious Diseases, 10 (2010), 111, 7 S. DOI dx.doi.org/10.1186/1471-2334-10-111
  • Yerebakan C, Klopsch C, Niefeldt S, Zeisig V, Vollmar B, Liebold A, Sandica E, Steinhoff G. Acute and chronic response of the right ventricle to surgically induced pressure and volume overload – an analysis of pressure-volume relations. Interact Cardiovasc Thorac Surg. 10 (2010), 4, S. 519–25.
  • Yerebakan C, Sandica E, Prietz S, Klopsch C, Ugurlucan M, Kaminski A, Abdija S, Lorenzen B, Boltze J, Nitzsche B, Egger D, Barten M, Furlani D, Ma N, Vollmar B, Liebold A, Steinhoff G. Autologous umbilical cord blood mononuclear cell transplantation preserves right ventricular function in a novel model of chronic right ventricular volume overload. Cell Transplant, 18 (2009), 8, S. 855-68.
  • zur Nieden NI, Baumgartner L. Assessing developmental osteotoxicity of chlorides in the embryonic stem cell test. Reprod Toxicol. 30 (2010), 2, S. 277–283.
  • zur Nieden NI, Davis LA, Rancourt DE. Comparing three novel endpoints for developmental osteotoxicity in the embryonic stem cell test. Toxicol Appl Pharmacol. 247 (2010), 2, S. 91–97.
  • zur Nieden NI, Davis LA, Rancourt DE. Monolayer cultivation of osteoprogenitors shortens duration of the embryonic stem cell test while reliably predicting developmental osteotoxicity. Toxicology.277 (2010), 1–3, S. 66–73.

Publikationen 2009

  • Althues H, Pötschke P, Kim G M, Kaskel S. Structure and Mechanical Properties of Transparent ZnO/PBDMA Nanocomposites. J Nanosci Nanotechno, 9 (2009), 4, S. 2739-2745.
  • Aupperle H, Thielebein J, Kiefer B, März I, Dinges G, Schoon HA, Schubert A. Expression of genes encoding matrix metalloproteinases (MMPs) and their tissue inhibitors (TIMPs) in normal and diseased canine mitral valves. J Comp Pathol, 140 (2009), 4, S. 271-277.
  • Borte S, Liebert UG, Borte M, Sack U. Efficacy of measles, mumps and rubella revaccination in children with juvenile idiopathic arthritis treated with methotrexate and etanercept. Rheumatology, 48 (2009), 2, S. 144-148.
  • Borte S, Pan-Hammarstrom Q, Liu C, Sack U, Borte M, Wagner U, Graf D, Hammarström L. Interleukin-21 restores immunoglobulin production ex vivo in patients with common variable immunodeficiency and selective IgA deficiency. Blood, 114 (2009), 19, S. 4089-4098.
  • Burkhardt J, Petit-Teixeira E, Teixeira VH, Kirsten H, Garnier S, Ruehle S, Oeser C, Wolfram G, Scholz M, Migliorini P, Balsa A, Westhovens R, Barrera P, Alves H, Pascual-Salcedo D, Bombardieri S, Dequeker J, Radstake TR, Van Riel P, van de Putte L, Bardin T, Prum B, Buchegger-Podbielski U, Emmrich F, Melchers I, Cornelis F, Ahnert P. Association of the X-chromosomal genes TIMP1 and IL9R with rheumatoid arthritis. J Rheumatol, 36 (2009), 10, S.2149-2157.
  • Conant G, Stadler PF. Solvent exposure imparts similar selective pressures across a range of yeast proteins. Mol Biol Evol, 26 (2009), 5, S. 1155-1161.
  • Fisher M, Feuerstein G, Howells DW, Hurn PD, Kent TA, Savitz SI, Lo EH; STAIR Group. Update of the stroke therapy academic industry roundtable preclinical recommendations. Stroke, 40 (2009), 6, S. 2244-2250.
  • Fricke S, Ackermann M, Stolzing A, Schimmelpfennig C, Hilger N, Jahns J, Hildebrandt G, Emmrich F, Ruschpler P, Pösel C, Kamprad M, Sack U. Allogeneic non-adherent bone marrow cells facilitate hematopoietic recovery but do not lead to allogeneic engraftment. PLoS One  (2009), Jul 7, 4(7), e6157.
  • Fricke S, Fricke C, Schimmelpfennig C, Oelkrug C, Schönfelder U, Blatz R, Faber S, Zilch C, Hilger N, Ruhnke M, Rodloff A. New Real-time PCR assay for the differentiation of Candida species. Appl Microbiol (2009) (accepted JAM-2009-2135).
  • Härtig W, Reichenbach A, Voigt C, Boltze J, Bulavina L, Schuhmann MU, Seeger J, Schusser GF, Freytag C, Grosche J. Triple fluorescence labelling of neuronal, glial and vascular markers revealing pathological alterations in various animal models. J Chem Neuroanat, 37 (2009), 2, S. 128-138.
  • Heinrich A, Riethmüller D, Gloger M, Schusser GF, Giese M, Ulbert S. RNA interference protects horse cells in vitro from infection with Equine Arteritis Virus. Antivir Res, 81 (2009), 3, S. 209-216.
  • Heintz D, Gallien S, Wischgoll S, Ullmann AK, Schaeffer C, Kretzschmar AK, van Dorsselaer A, Boll M. Differential membrane proteome analysis reveals novel proteins involved in the degradation of aromatic compounds in Geobacter metallireducens. Mol Cell Proteomics, 8 (2009), 9, S. 2159-2169.
  • Hellmuth M, Imrich W, Klöckl W, Stadler PF. Approximate graph products. Eur J Combin, 30 (2009), 5, S. 1119-1133.
  • Herberth G, Gubelt R, Röder S, Krämer U, Schins RP, Diez U, Borte M, Heinrich J, Wichmann HE, Herbarth O, Lehmann I, LISA plus study group. Increase of inflammatory markers after indoor renovation activities: the LISA birth cohort study. Pediatr Allergy Immu, 20 (2009), 6, S. 563-570.
  • Hertel J, De Jong D, Marz M, Rose D, Tafer H, Tanzer A, Schierwater B, Stadler PF. Non-coding RNA annotation of the genome of Trichoplax adhaerens. Nucleic Acids Res, 37 (2009), 5, S. 1602-1615.
  • Hoffmann S, Otto C, Kurtz S, Sharma CM, Khaitovich P, Vogel J, Stadler PF, Hackermüller J. Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures. PLoS Comput Biol, 5 (2009), 5(9), e1000502.
  • Jaen O, Petit-Teixeira E, Kirsten H, Ahnert P, Semerano L, Pierlot C, Cornelis F, Boissier MC, Falgarone G; European Consortium on Rheumatoid Arthritis Families. No evidence of major effects in several Toll-like receptor gene polymorphisms in rheumatoid arthritis. Arthritis Res Ther. 2009;11(1):R5. Epub 2009 Jan 13.
  • Kaczkowski B, Torarinsson E, Reiche K, Havgaard JH, Stadler PF, Gorodkin J. Structural profiles of human miRNA families from pairwise clustering. Bioinformatics, 25 (2009), 3, S. 291-294.
  • Kirsten H, Burkhardt J, Hantmann H, Hunzelmann N, Vaith P, Ahnert P, Melchers I. 5HT2A polymorphism His452Tyr in a German Caucasian systemic sclerosis population. Arthritis Res Ther, 11 (2009), 2, S. 403.
  • Kirsten H, Petit-Teixeira E, Hantmann H, Reichardt J, Burkhardt J, Emmrich F, Cornelis F, Ahnert P. A family-based study does not support the association of a functional polymorphism in the gene for endothelial nitric oxide synthase with risk for rheumatoid arthritis. Scand J Rheumatol, 38 (2009), 4, S. 320-321.
  • Kirsten H, Petit-Teixeira E, Scholz M, Hasenclever D, Hantmann H, Heider D, Wagner U, Sack U, Hugo Teixeira V, Prum B, Burkhardt J, Pierlot C, Emmrich F, Cornelis F, Ahnert P. Association of MICA with rheumatoid arthritis independent of known HLA-DRB1 risk alleles in a family-based and a case control study. Arthritis Res Ther, 11 (2009), 3, R60.
  • Krämer U, Sugiri D, Ranft U, Krutmann J, von Berg A, Berdel D, Behrendt H, Kuhlbusch T, Hochadel M, Wichmann HE, Heinrich J, GINIplus and LISAplus study groups. Eczema, respiratory allergies, and traffic-related air pollution in birth cohorts from small-town areas. J Dermatol Sci, 56 (2009), 2, S. 99-105.
  • Krupka I, Knauer J, Lorentzen L, O‘Connor TP, Saucier J, Straubinger RK. Borrelia burgdorferi sensu lato species in Europe induce diverse immune responses against C6 peptides in infected mice. Clin Vaccine Immunol, 16 (2009), 11, S. 1546-1562.
  • Lee SM, Grass G, Kim G M, Dresbach C, Zhang L, Gösele U, Knez M. Low-temperature ZnO atomic layer deposition on biotemplates: flexible photocatalytic ZnO structures from Eggshell Membranes. Phys Chem Chem Phys, 11 (2009), 19, S. 3608-3614.
  • Meier H, Bullinger J, Marx G, Deten A, Horn LC, Rassler B, Zimmer HG, Briest W. Crucial role of interleukin-6 in the development of norepinephrine-induced left ventricular remodeling in mice. Cell Physiol Biochem, 23 (2009), 3-4, S. 327-334.
  • Quintana L, zur Nieden NI, Semino CE. Morphogenetic and regulatory mechanisms during devel­opmental chondrogenesis. Tissue Eng Pt B-Rev, 15 (2009), 1, S. 29-41.
  • Sack U, Conrad K, Csernok E, Frank I, Hiepe F, Krieger T, Kromminga A, Landenberg P, Messer G, Witte T, Mierau R, die deutsche EASI-Gruppe (European Autoimmunity Standardization Initiative). Autoantikörpernachweis mittels indirekter Immunfluoreszenz an HEp-2-Zellen. Deut Med Wochenschr, 134 (2009), 24, S. 1278-1282.
  • Sack U, Conrad K, Csernok E, Frank I, Hiepe F, Krieger T, Kromminga A, von Landenberg P, Messer G, Witte T, Mierau R, German EASI (European Autoimmunity Standardization Initiative). Autoantibody detection using indirect immunofluorescence on HEp-2 cells. Ann NY Acad Sci, 1173 (2009), S. 166-73.
  • Saver JL, Albers GW, Dunn B, Johnston KC, Fisher M, STAIR VI Consortium. Stroke Therapy Academic Industry Roundtable (STAIR) recommendations for extended window acute stroke therapy trials. Stroke, 40 (2009), 7, S. 2594-2600.
  • Scheibye-Alsing K, Hoffmann S, Frankel A, Jensen P, Stadler PF, Mang Y, Tommerup N, Gilchrist MJ, Nygard AB, Cirera S, Jorgensen CB, Fredholm M, Gorodkin J. Sequence assembly: review. Comput Biol Chem, 33 (2009), 2, S. 121-136.
  • Schlomann U, Schwamborn JC, Müller M, Fässler R, Püschel AW. The stimulation of dendrite growth by Sema3A requires integrin engagement and focal adhesion kinase. J Cell Sci. 2009 Jun 15;122(Pt 12):2034-42. Epub 2009 May 19.
  • Scholz M, Ackermann M, Emmrich F, Loeffler M, Kamprad M. Effectiveness of cytopenia prophylaxis for different filgrastim and pegfilgrastin schedules in a chemotherapy mouse model. Biologics 3 (2009), S. 27-37.
  • Scholz M, Kamprad M, Ackermann M, Löffler M, Emmrich F, Engel Ch. A Pharmacokinetic Model of Filgrastim and Pegfilgrastim application in Normal and Cyclophosphamide Induced Granulopenic Mice. Cell Proliferat 42 (2009), 6, S. 813-22.
  • Simon P, Burkhardt U, Sack U, Kaisers UX, Muensterer OJ. Inflammatory Response Is No Different in Children Randomized to Laparoscopic or Open Appendectomy. J Laparoendosc Adv A, 19 (2009), Suppl 1, S. S71-S76.
  • Sommer G, Kralisch S, Stangl V, Vietzke A, Köhler U, Stepan H, Faber R, Schubert A, Lössner U, Bluher M, Stumvoll M, Fasshauer M. Secretory products from human adipocytes stimulate proinflammatory cytokine secretion from human endothelial cells. J Cell Biochem, 106 (2009), 4, S. 729-37.
  • Stadler PF, Chen JJ, Hackermüller J, Hoffmann S, Horn F, Khaitovich P, Kretzschmar AK, Mosig A, Prohaska SJ, Qi X, Schutt K, Ullmann K. Evolution of vault RNAs. Mol Biol Evol, 26 (2009), 9, S. 1975-91.
  • Stroh A, Boltze J, Sieland K, Hild K, Gutzeit C, Jung T, Kressel J, Hau S, Reich D, Grune T, Zimmer C. Impact of magnetic labeling on human and mouse stem cells and their long-term magnetic resonance tracking in a rat model of Parkinson disease. Mol Imaging, 8 (2009), 3, S. 166-78.
  • Tessema B, Muche A, Bekele A, Reissig D, Emmrich F, Sack U. Treatment outcome of tuberculosis patients at Gondar University Teaching Hospital, Northwest Ethiopia. A five - year retrospective study. BMC Public Health, 4 (2009), 371.
  • Wechsler L, Steindler D, Borlongan C, Chopp M, Savitz S, Deans R, Caplan L, Hess D, Mays RW, Boltze J, Boncoraglio G, Borlongan CV, Caplan LR, Carmichael ST, Chopp M, Davidoff AW, Deans RJ, Fisher M, Hess DC, Kondziolka D, Mays RW, Norrving B, Parati E, Parent J, Reynolds BA, Gonzalez-Rothi LJ, Savitz S, Sanberg P, Schneider D, Sinden JD, Snyder E, Steinberg GK, Steindler D, Wechsler L, Weiss MD, Weiss S, Victor S, Zheng T. Stem Cell Therapies as an Emerging Paradigm in Stroke Participants. Stem Cell Therapies as an Emerging Paradigm in Stroke (STEPS): bridging basic and clinical science for cellular and neurogenic factor therapy in treating stroke. Stroke, 40 (2009), 2, S. 510-5.
  • Wilcke A, Weissfuss J, Kirsten H, Wolfram G, Boltze J,Ahnert P. The role of gene DCDC2 in German dyslexics. Ann Dyslexia, 59 (2009), 1, S. 1-11.
  • Yerebakan C, Klopsch C, Prietz S, Boltze J, Vollmar B, Liebold A, Steinhoff G, Sandica E. Pressure-volume loops: feasible for the evaluation of right ventricular function in an experimental model of acute pulmonary regurgitation? Interact Cardiovasc Thorac Surg, 9 (2009), 2, S. 163-8.
  • Yerebakan C, Sandica E, Prietz S, Klopsch C, Ugurlucan M, Kaminski A, Abdija S, Lorenzen B, Boltze J, Nitzsche B, Egger D, Barten M, Furlani D, Ma N, Vollmar B, Liebold A, Steinhoff G. Autologous umbilical cord blood mononuclear cell transplantation preserves right ventricular function in a novel model of chronic right ventricular volume overload. Cell Transplant, 18 (2009), 8, S. 855-68.

Publikationen 2008

  • Amemiya CT, Prohaska SJ, Hill-Force A, Cook A, Wasserscheid J, Ferrier DEK, Pascual-Anaya J, Garcia-Fernandez J, Dewar K, Stadler PF. The amphioxus Hox cluster: Characterization, comparative genomics, and evolution. J Exp Zool Part B 310B (2008), 5, S. 465-477.
  • Aupperle H, März I, Schubert A, Dinges G, Thielebein J, Schoon HA. Störungen des Metabolismus der extrazellularmatrix des Herzens bei der kaninen idiopathischen dilatativen Kardiomyopathie. Der praktische Tierarzt 89 (2008), 12, S. 998-1005.
  • Bernhart SH, Hofacker IL, Will S, Gruber AR, Stadler PF. RNAalifold. Improved consensus structure prediction for RNA alignments. BMC Bioinformatics. Online journal 9 (2008), Art. 474, 13S.
  • Bockamp E, Sprengel R, Eshkind L, Lehmann T, Braun JM, Emmrich F, Hengstler JG. Conditional transgenic mouse models: from the basics to genome-wide sets of knockouts and current studies of tissue regeneration. Regen Med 3 (2008), 2, S. 217-35.
  • Bold A, Wurth R, Keller T, Trahorsch T, Voigt P, Schubert S, Sack U. Low-cost enumeration of CD4+ T cells using a density-based negative selection method (RosettaSepTM) for the monitoring of HIV-infected individuals in non-OECD countries. Cytom Part A 73 (2008), 1, S. 28-35.
  • Boltze J, Förschler A, Nitzsche B, Waldmin D, Hoffmann A, Boltze CM, Oreyer AY, Goldammer A, Reischauer A, Härtig W, Geiger KD, Barthel H, Emmrich F, Gille U. Permanent middle cerebral artery occlusion in sheep: a novel large animal model of focal cerebral ischemia. J Cerebr Blood F Met 28 (2008), 12, 1951-64.
  • Cepok S, Hoffmann S, Grummel V, Lehmann-Horn K, Hackermüller J, Stadler PF, Hartung HP, Berthele A, Deisenhammer F, Wasmuth R, Hemmer B. HLA-DRB1 0401 and HLA-DRB1 0408 are strongly associated with the development of antibodies against interferon-beta therapy in multiple sclerosis. J Neuroimmunol 203 (2008), 2, S. 194.
  • Daegelmann C, Herberth G, Röder S, Herbarth O, Giese T, Krämer U, Behrendt H, Borte M, Heinrich J, Emmrich F, Lehmann I; LISAplus study group. Association between suppressors of cytokine signalling, T-helper type 1/T-helper type 2 balance and allergic sensitization in children. Clin Exp Allergy 38 (2008), 3, S. 438-48.
  • Davis LA, zur Nieden NI. Mesodermal fate decisions of a stem cell: the Wnt switch. Cell Mol Life Sci 65 (2008), 17, S. 2658-2674.
  • Dress AWM, Flamm C, Fritzsch G, Grünewald S, Kruspe M, Prohaska SJ, Stadler PF. Noisy: Identification of problematic columns in multiple sequence alignments. Algorithm Mol Biol. Online journal 3 (2008), Art. 7, 10S.

  • Focke A, Schwarz S, Foerschler A, Scheibe J, Milosevic J, Zimmer C, Schwarz J. Labeling of human neural precursor cells using ferromagnetic nanoparticles. Magn Reson Med. 2008 Dec;60(6):1321-8.

  • Geis M, Flamm C, Wolfinger MT, Tanzer A, Hofacker IL, Middendorf M, Mandl C, Stadler PF, Thurner C. Folding kinetics of large RNAs. J Mol Biol 379 (2008), 1, S. 160-173.
  • Gessner C, Dihazi H, Brettschneider S, Hammerschmidt S, Kuhn H, Eschrich K, Keller T, Engelmann L, Sack U, Wirtz H. Presence of cytokeratins in exhaled breath condensate of mechanical ventilated patients. Resp Med 102 (2008), 2, S. 299-306.
  • Goettsch W, Schubert A, Morawietz H. Expression of human endothelinconverting enzyme isoforms: role of angiotensin II. Can J Physiol Pharm 86 (2008), 6, S. 299-309.
  • Gruber AR, Kilgus C, Mosig A, Hofacker IL, Hennig W, Stadler PF. Arthropod 7SK RNA. Mol Biol Evol 25 (2008), 9, S. 1923-1930.
  • Hau S, Reich DM, Scholz M, Naumann W, Emmrich F, Kamprad M, Boltze, J. Evidence for neuroprotective properties of human umbilical cord blood cells after neuronal hypoxia in vitro. BMC Neurosci (2008), 9, S. 30.
  • Haussig S, Schubert A, Mohr FW, Dhein S. Sub-chronic nicotine exposure induces intercellular communication failure and differential down-regulation of connexins in cultured human endothelial cells. Atherosclerosis 196 (2008), 1, S. 210-8.
  • Hemdan NY. The role of interleukin-12 in the heavy metal-elicited immunomodulation: relevance of various evaluation methods. J Occup Med Toxicol 3 (2008), Art 25, 14S.
  • Hertel J, Hofacker IL, Stadler PF. SnoReport: Computational identification of snoRNAs with unknown targets. Bioinformatics 24 (2008), 2, S. 158-164.
  • Hoffmann S, Cepok S, Grummel V, Lehmann-Horn K, Hackermüller J, Stadler PF, Hartung HP, Berthele A, Deisenhammer F, Wassmuth R, Hemmer B. HLA-DRB1*0401 and HLADRB1* 0408 are strongly associated with the development of antibodies against interferon-beta therapy in multiple sclerosis. Am J Hum Genet 83 (2008), 2, S. 219-27.
  • Hollenbach M, Hintersdorf A, Huse K, Sack U, Bigl M, Groth M, Santel T, Buchold M, Lindner I, Otto A, Sicker D, Schellenberger D, Almendinger J, Pustowoit B, Birkemeyer C, Platzer M, Oerlecke I, Hemdan NY, Birkenmeier G. Ethyl pyruvate and ethyl lactate down-regulate the production of pro-inflammatory cytokines and modulate expression of immune receptors. Biochem Pharmacol 76 (2008), 5, S. 631-644.
  • Hoppe A, Kamprad M, Wegmann C, Wötzel M, Hauss J, Emmrich F, Fangmann J, Sack U. Natürliche Killerzellen und natürliche Killer-T-Zellen bei Nierentransplanta­tion. Laboratoriumsmedizin 32 (2008), 3, S. 140-147.
  • Jochl C, Rederstorff M, Hertel J, Stadler PF, Hofacker IL, Schrettl M, Haas H, Hüttenhofer A. Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein synthesis. Nucleic Acids Res 36 (2008), 8, S. 2677-2689.
  • Jung C, Stöckle C, Wiesmüller KH, Laub R, Emmrich F, Jung G, Melms A. Complementary strategies to elucidate T helper cell epitopes in myasthenia gravis. J Neuroimmunol 201/202 (2008), S. 41-49.
  • Kendziorra K, Barthel H, Erbs S, Emmrich F, Hambrecht R, Schuler G, Sabri O, Kluge R. Effect of Progenitor Cells on Myocardial Perfusion and Metabolism in Patients After Recanalization of a Chronically Occluded Coronary Artery. J Nucl Med 48 (2008), 4, S. 557-563.
  • Kirsten H, Blume M, Emmrich F, Hunzelmann N, Mierau R, Rzepka R, Vaith P, Witte T, Melchers I, Ahnert P. No association between Systemic Sclerosis and the C77G Polymorphism in the Human PTPRC (CD45) Gene. J Rheumatol 35 (2008), 9, S. 1817-1819.
  • Klemm K, Flamm C, Stadler PF. Funnels in energy landscapes. Eur Phys J B 63 (2008), 3, S. 387-391.
  • Kralisch S, Sommer G, Stangl V, Köhler U, Kratzsch J, Stepan H, Faber R, Schubert A, Lössner U, Vietzke A, Bluher M, Stumvoll M, Fasshauer M. Secretory products from human adipocytes impair endothelial function via nuclear factor kappaB. Atherosclerosis 196 (2008), 2, S. 523-31.
  • Krauss V, Thummler C, Georgi F, Lehmann J, Stadler PF, Eisenhardt C. Near intron positions are reliable phylogenetic markers: An application to holometabolous insects. Mol Biol Evol 25 (2008), 5, S. 821-830.
  • Krupp W, Holland H, Koschny R, Bauer M, Schober R, Kirsten H, Livrea M, Meixensberger J, Ahnert P. Genome-wide genetic characterization of an atypical meningioma by single-nucleotide polymorphism array-based mapping and classical cytogenetics. Cancer Genet Cytogenet. 2008 Jul 15;184(2):87-93.
  • Kyaw WO, Uhlig A, Koller G, Sack U, Schusser GF. Freies Hämoglobin und Tumor-Nekrose-Faktor-Alpha im Blut von Pferden mit Kolik oder akuter Kolitis. Berl Munch Tierarztl W 121 (2008), 11-12, S. 440-445.
  • Lehmann J, Stadler PF, Prohaska SJ. SynBlast: Assisting the analysis of conserved synteny information. BMC Bioinformatics. Online journal 9 (2008), Art. 351, 14S.
  • Marz M, Kirsten T, Stadler PF. Evolution of spliceosomal snRNA genes in metazoan animals. J Mol Evol 67 (2008), 6, S. 594-607.
  • Morgenstern V, Zutavern A, Cyrys J, Brockow I, Koletzko S, Krämer U, Behrendt H, Herbarth O, von Berg A, Bauer CP, Wichmann HE, Heinrich J; GINI Study Group; LISA Study Group. Atopic diseases, allergic sensitization, and exposure to trafficrelated air pollution in children. Am J Resp Crit Care M 177 (2008), 12, S. 1331-1337.
  • Perseke M, Fritzsch G, Ramsch K, Bernt M, Merkle D, Middendorf M, Bernhard D, Stadler PF, Schlegel M. Evolution of mitochondrial gene orders in echinoderms. Mol Phylogenet Evol 47 (2008), 2, S. 855-864.
  • Pfefferkorn P, Scholz U, Veneruso V, Nikolaus T, Madin K, Eichenlaub U, Schubert A, Lehmann J. Influence of Serum Deprivation on Adherence and Proliferation of Murine Mesenchymal Progenitor Cells Analysed with Roche´s xCELLigence System. Biochemica (2008), 4, S. 14-16.
  • Pierzchalski A, Robitzki A, Mittag A, Emmrich F, Sack U, O‘Connor JE, Bocsi J, Tarnok A. Cytomics and nanobioengineering. Cytom Part B-Clin Cy 74 (2008), 6, S. 416-426.
  • Reich DM, Hau S, Stahl T, Scholz M, Naumann W, Emmrich F, Boltze J, Kamprad M. Neuronal hypoxia in vitro: investigation of therapeutic principles of HUCB-MNC and CD133+ stem cells. BMC Neurosci (2008), 9, S. 91.
  • Rose D, Hertel J, Reiche K, Stadler PF, Hackermüller J. NcDNAlign: plausible multiple alignments of non-proteincoding genomic sequences. Genomics 92 (2008), 1, S. 65-74.
  • Rose D, Jöris J, Hackermüller J, Reiche K, Li Q, Stadler PF. Duplicated RNA genes in teleost fish genomes. J Bioinform Comput Biol 6 (2008), 6, 1157-75.
  • Sack U, Emmrich F. Monoklonale Antikörper: Prinzipien, Herstellung, Anwendung und Nebenwirkungen. Internist 49 (2008), 8, S. 921-928.
  • Santel T, Pflug G, Hemdan NY, Schafer A, Hollenbach M, Buchold M, Hintersdorf A, Lindner I, Otto A, Bigl M, Oerlecke I, Hutschenreuter A, Sack U, Huse K, Groth M, Birkemeyer C, Schellenberger W, Gebhardt R, Platzer M, Weiss T, Vijayalakshmi MA, Kruger M, Birkenmeier G. Curcumin inhibits glyoxalase 1: a possible link to its antiinflammatory and anti-tumor activity. PLoS ONE (2008), 3, S. e3508.
  • Schimmelpfennig C. Biolumineszenz- und Fluoreszenz-Imaging: Ein neues Verfahren zur nicht-invasiven Bildgebung von zellbiologischen Prozessen in Kleintieren. Ingenieur Nachrichten (2008), 2, S. 10.
  • Schimmelpfennig C, Schmiedeknecht A, Emmrich F. Visualisierung von Immunfunktionen mithilfe von Biolumineszenz Imaging. Biospektrum 14 (2008), 5, S. 481-482.
  • Schoefer Y, Zutavern A, Brockow I, Schäfer T, Krämer U, Schaaf B, Herbarth O, von Berg A, Wichmann HE, Heinrich J; LISA study group. Health risks of early swimming pool attendance. Int J Hyg Envir Heal 211 (2008), 3-4, S. 367-73.
  • Schulz SM, Köhler G, Schütze N, Knauer J, Straubinger RK, Chackerian AA, Witte E, Wolk K, Sabat R, Iwakura Y, Hölscher C, Müller U, Kastelein RA, Alber G. Protective immunity to systemic infection with attenuated Salmonella enterica serovar enteritidis in the absence of IL-12 is asso ciated with IL-23-dependent IL-22, but not IL-17. J Immunol 181 (2008), 11, S. 7891-901.
  • Sonnleitner E, Sorger-Domenigg T, Madej MJ, Findeiss S, Hackermüller J, Hüttenhofer A, Stadler PF, Bläsi U, Moll I. Detection of small RNAs in Pseudomonas aeruginosa by RNomics and structure-based bioinformatic tools. Microbiology 154 (2008), 10, S. 3175-87.
  • Stolzing A, Jones E, McGonagle D, Scutt A. Age related changes in human bone marrow-derived mesenchymal stem cells: consequences for cell therapies. Mech Ageing Dev, 129 (2008), 3, S. 163-173.
  • Treese C, Mittag A, Lange F, Tarnok A, Loesche A, Emmrich F, Lehmann J, Sack U. Characterization of fibroblasts responsible for cartilage destruction in arthritis. Cytom Part A 73 (2008), 3, S. 351-360.
  • Trepnau D, Ulrich E, Uhlig R, Lindner T, Selbitz HJ, Rösler U, Gabert J, Bergfeld U, Fehlhaber K, Brabetz W, Lehmann J. Antikörperantwort nach Impfung von Mastschweinen mit einem Salmonella-Typhimurium-Lebendimpfstoff in Abhängigkeit von der Applikationsform. Berl Munch Tierarztl 121 (2008), 9-10, S. 334-340.
  • Ueberham E, Lindner R, Kamprad M, Hiemann R, Hilger N, Woithe B, Mahn D, Cross M, Sack U, Gebhardt R, Arendt T, Ueberham U. Oval cell proliferation in p16INK4a expressing mouse liver is triggered by chronic growth stimuli. J Cell Mol Med 12 (2008), 2, S. 622-638.
  • Weimann A, Eisele RM, Pawellek S, Hippler-Benscheid M, Rüggeberg A, Cammann H, Radke C, Müller C, Klupp J, Sack U, Lun A. Diagnostic value of peripheral blood markers for acute rejection in LTX-patients receiving anti IL-2R antibodies. Laboratoriumsmedizin 32 (2008), 3, S. 148-157.
  • Willms H, Wiechmann V, Sack U, Gillissen A. Tracheobronchopathia osteochondroplastica: A rare cause of chronic cough with haemoptysis. Cough 4 (2008), 4, 4S.
  • Zutavern A, Brockow I, Schaaf B, von Berg A, Diez U, Borte M, Kraemer U, Herbarth O, Behrendt H, Wichmann HE, Heinrich J; LISA Study Group. Timing of solid food introduction in relation to eczema, asthma, allergic rhinitis, and food and inhalant sensitization at the age of 6 years: results from the prospective birth cohort study LISA. Pediatrics (2008), 121, S. e44-52.

Publikationen 2007

  • Ahnert P, Kirsten H. Association of ITGAV supports a role of angiogenesis in rheumatoid arthritis. Arthritis Res Ther. 2007;9(5):108.
  • Athanasius F, Bompfünewerer Consortium, Backofen R, Bernhart SH, Flamm C, Fried C, Fritzsch G, Hackermüller J, Hertel J, Hofacker IL, Missal K, Mosig A, Prohaska SJ, Rose D, Stadler PF, Tanzer A, Washietl S, Will S. RNAs everywhere: genome-wide annotation of structured RNAs. J Exp Zool Part B (2007), 308, S. 1-25.
  • Aupperle H, Garbade J, Schubert A, Barten M, Dhein S, Schoon HA, Mohr FW. Effects of autologous stem cells on immunohistochemical patterns and gene expression of metalloproteinases and their tissue inhibitors in doxorubicin cardiomyopathy in a rabbit model. Vet Pathol 44 (2007), 4, S. 494-503.
  • Averbeck M, Gebhardt C, Emmrich F, Treudler R, Simon JC. Immunologic principles of allergic disease. J Dtsch Dermatol Ges 5 (2007), 11, S. 1015-28.
  • Backofen R, Flamm C, Fried C, Fritzsch G, Hackermüller J, Hertel J, Hofacker IL, Missal K, Prohaska SJ, Mosig A, Rose D, Stadler PF, Tanzer A, Washietl S, Will S. RNAs everywhere: genome-wide annotation of structured RNAs. J Exp Zool Part B, 308B (2007), 1, S. 1-25.
  • Bernt M, Merkle D, Ramsch K, Fritzsch G, Perseke M, Bernhard D, Schlegel M, Stadler PF, Middendorf M. CREx: inferring genomic rearrangements based on common intervals. Bioinformatics 23 (2007), 21, S. 2957-2958.
  • Brulport M, Schormann W, Bauer A, Hermes M, Elsner C, Hammersen FJ, Beerheide W, Spitkovsky D, Hartig W, Nussler A, Horn LC, Edelmann J, Pelz-Ackermann O, Petersen J, Kamprad M, von Mach M, Lupp A, Zulewski H, Hengstler JG. Fate of extrahepatic human stem and precursor cells after transplantation into mouse livers. Hepatology 46 (2007), 3, S. 861-870.
  • Brumme S, Arnold T, Sigmarsson H, Lehmann J, Scholz HC, Hardt WD, Hensel A, Truyen H, Roesler U. Impact of Salmonella Typhimurium DT104 Virulence Factors invC and sseD affecting the onset, clinical course, colonization patterns and immune response of porcine salmonellosis. Vet Microbiol, 124 (2007), 3-4, S. 274-285.
  • Emmrich, F. Regenerative Medicine Today. BioWorld EUROPE Special Edition 1 (2007), S. 2-4.
  • ENCODE Project Consortium. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature (2007), 447, S. 799-816.
  • Fangmann J, Wegmann C, Hoppe A, Martin P, Sack U, Harms J, Faber S, Emmrich F. Characterization of dendritic cell subsets in patients undergoing renal transplantation. Transplant Proc 39 (2007), 10, S. 3101-3104.
  • Förschler A, Boltze J, Waldmin D, Gille U, Zimmer C. MRI of experimental focal cerebral ischemia in sheep. Rofo 179 (2007), 5, S. 516-24.
  • Gebauer CM, Lenk H, Friedrich W, Sack U, Schuster V. Severe clinical course of Wiskott-Aldrich-syndrome – clinical course, hematologic, immunologic and genetic findings. Kinder- und Jugendmedizin (2007), 7, S. 39-44.
  • Gessner C, Hammerschmidt S, Kuhn H, Hoheisel G, Gillissen A, Sack U, Wirtz H. Breath Condensate nitrite correlates with hyperinflation in chronic obstructive pulmonary disease. Resp Med 101 (2007), 11, S. 2271-2278.
  • Hackermüller J, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447 (2007), 7146, S. 799-816.
  • Hemdan NY, Emmrich F, Faber S, Lehmann J, Sack U. Alterations of Th1/Th2 reac tivity by heavy metals – Possible consequences include induction of autoimmune diseases. Ann NY Acad Sci (2007), 1109, S. 129-137.
  • Hemdan NY, Lehmann I, Wichmann G, Lehmann J, Emmrich F, Sack U. Immunomodulation by mercuric chloride in vitro: application of different cell activation pathways. Clin Exp Immunol 148 (2007), 2, S. 325-37.
  • Hiemann R, Hilger N, Michel J, Nitschke J, Bohm A, Anderer U, Weigert M, Sack U. Automatic analysis of immunofluorescence patterns of HEp-2 cells. Ann NY Acad Sci 1109 (2007), 1, S. 358-371.

  • Holland H, Koschny R, Krupp W, Meixensberger J, Bauer M, Kirsten H, Ahnert P. Comprehensive cytogenetic characterization of an esthesioneuroblastoma. Cancer Genet Cytogenet. 2007 Mar;173(2):89-96.

  • Holland H, Koschny R, Krupp W, Meixensberger J, Bauer M, Schober R, Kirsten H, Ganten TM, Ahnert P. Cytogenetic and molecular biological characterization of an adult medulloblastoma. Cancer Genet Cytogen 178 (2007), 2, S. 104-113.
  • Kaltenhäuser S, Pierer M, Arnold S, Kamprad M, Baerwald C, Hantzschel H, Wagner U. Anti-bodies against cyclic citrullinated peptide are associated with the DRB1 shared epitope and predict joint erosion in rheumatoid arthritis. Rheumatology 46 (2007), 1, S. 100-104.
  • Kamprad M, Kindler S, Schuetze N, Emmrich F. Flow cytometric immunophenotyping of umbilical cord and peripheral blood haematopoietic progenitor cells by different CD34 epitopes, CD133, P-glycoprotein expression and rhodamine-123 efflux. Transfus Med  Hemoth 34 (2007), 3, S. 195-203.
  • Kapranov P, Cheng J, Dike S, Nix DA, Duttagupta R, Willingham AT, Stadler PF, Hertel J, Hackermüller J, Hofacker IL, Bell I, Cheung E, Drenkow J, Dumais E, Patel S, Helt G, Ganesh M, Ghosh S, Piccolboni A, Sementchenko V, Tammana H, Gingeras TR. RNA maps reveal new RNA classes and a possible function for pervasive transcription. Science  316 (2007), 5830, S. 1484-1488.
  • Kirsten H, Teupser D, Weissfuss J, Wolfram G, Emmrich F, Ahnert P. Robustness of single-base extension against mismatches at the site of primer attachment in a clinical assay. J Mol Med 85 (2007), 4, S. 361-9.
  • Kruspe M, Stadler PF. Progressive multiple sequence alignments from triplets. BMC Bioinformatics. Online journal 8 (2007), S. 254.
  • Löffler D, Brocke-Heidrich K, Pfeifer G, Stocsits C, Hackermüller J, Kretzschmar AK, Burger R, Gramatzki M, Blumert C, Bauer K, Cvijic H, Ullmann AK, Stadler PF, Horn F. Interleukin-6 dependent survival of multiple myeloma cells involves the Stat3-mediated induction of microRNA-21 through a highly conserved enhancer. Blood 110 (2007), 4, S. 1330-3.
  • Meng GL, zur Nieden NI, Liu SY, Cormier JT, Kallos MS, Rancourt DE. Properties of murine embryonic stem cells maintained on human foreskin fibroblasts without LIF. Mol Reprod Dev, 75 (2007), 4, S. 614-622.
  • Mosig A, Guofeng M, Stadler BMR, Stadler PF. Evolution of the vertebrate Y RNA cluster. Theor Biosci 126 (2007), 1, S. 9-14.
  • Rose D, Hackermüller J, Washietl S, Reiche K, Hertel J, Findeiß S, Stadler PF, Prohaska SJ. Computational RNomics of drosophilids. BMC Genomics. Online journal 8 (2007), Art. 406.
  • Saalbach A, Klein C, Sleeman J, Sack U, Kauer F, Gebhardt C, Averbeck M, Anderegg U, Simon JC. Dermal fibroblasts induce maturation of dendritic cells. J Immunol 178 (2007), 8, S. 4966-4974.
  • Sack U, Bocsi J, Tarnok A. Importance of cytometry for clinical diagnostics and therapy. Transfus Med Hemoth 34 (2007), 3, S. 153-154.
  • Sack U, Conrad K, Csernok E, Frank I, Haass M, Krieger T, Seyfarth M, Schlosser U, Schmidt R, Witte T. Standardization of autoimmune diagnostics in Germany: activities of the German group in the European Autoimmune Standardization Initiative. Ann NY Acad Sci (2007), 1109, S. 31-36.
  • Sack U, Gerling F, Tarnok A. Age-related lymphocyte subset changes in the peripheral blood of healthy children – A metastudy. Transfus Med Hemoth 34 (2007), 3, S. 176-181.
  • Savkovic V, Gantzer H, Reiser U, Selig L, Gaiser S, Sack U, Kloppel G, Mossner J, Keim V, Horn F, Bodeker H. Clusterin is protective in pancreatitis through anti-apoptotic and anti-inflammatory properties. Biochem Bioph Res Co 356 (2007), 2, S. 431-437.
  • Schloendorn J, Sethe S, Stolzing A. Cellular therapy using microglial cells. Rejuv Res 10 (2007), 1, S. 87-99.

  • Schmidt A, Haas SJ, Hildebrandt S, Scheibe J, Eckhoff B, Racek T, Kempermann G, Wree A, Pützer BM. Selective targeting of adenoviral vectors to neural precursor cells in the hippocampus of adult mice: new prospects for in situ gene therapy. Stem Cells. 2007 Nov;25(11):2910-8. Epub 2007 Jul 19.

  • Schwenk M, Sack U, Esser C, Klein R. Diagnostic relevance of the determination of lymphocyte subpopulations in environmental medicine. Int J Hyg Envir Heal 210 (2007), 2, S. 177-198.
  • Schwamborn JC, Müller M, Becker AH, Püschel AW. Ubiquitination of the GTPase Rap1B by the ubiquitin ligase Smurf2 is required for the establishment of neuronal polarity. EMBO J. 2007 Mar 7;26(5):1410-22. Epub 2007 Feb 22.
  • Sharma N, Kaur J, Xhu H, zur Nieden NI, Rancourt DE. Characterization of secretory leukocyte protease inhibitor (SLPI) as an inhibitor of implantation serine proteinase. Mol Reprod Dev, 75 (2007), 7, S. 1136-1142.
  • Stolzing A, Hescheler J, Sethe S. Fusion and regenerative therapies: is immortality really recessive? Rejuv Res 10 (2007), 4, S. 571-86.
  • Tanneberger K, Kirchberger J, Bar J, Schellenberger W, Rothemund S, Kamprad M, Otto H, Schoneberg T, Edelmann A. A novel form of 6-phosphofructokinase – Identification and functional relevance of a third type of subunit in pichia pastoris. J Biol Chem 282 (2007), 32, S. 23687-23697.
  • Washietl S, Pedersen JS, Korbel JO, Stocsits C, Gruber AR, Hackermüller J, Hertel J, Lindemeyer M, Reiche K, Tanzer A, Ucla C, Wyss C, Antonarakis SE, Denoeud F, Lagarde J, Drenkow J, Kapranov P, Gingeras TR, Guigó R, Snyder M, Gerstein MB, Reymond A, Hofacker IL, Stadler PF. Structured RNAs in the ENCODE selected regions of the human genome. Genome Res 17 (2007), 6, S. 852-64.
  • zur Nieden NI, Cormier JT, Rancourt DE, Kallos MS. Embryonic stem cells remain highly pluripotent following long term expansion as aggregates in suspension bioreactors. J Biotechnol 129 (2007), 3, S. 421-432.
  • zur Nieden NI, Price FD, Davis LA, Everitt R, Rancourt DE. Gene profiling on mixed embryonic stem cell populations reveals a biphasic role for beta-catenin in osteogenic differentiation. Mol Endocrinol 21 (2007), 3, S. 674-685.

Publikationen 2005

  • Aust G, Kamprad M, Lamesch P, Schmücking E. CXCR6 within T-helper (Th) and T-cytotoxic (Tc) type 1 lymphocytes in Graves’ disease (GD). Eur J Endocrinol, 152 (2005), 4, S. 635-643.
  • Boltze J, Kowalski I, Geiger K, Reich D, Gunther A, Buhrle C, Egger D, Kamprad M, Emmrich F. Experimental treatment of stroke in spontaneously hypertensive rats by CD34+ and CD34-cord blood cells. Ger Med Sci, 3, Doc09 (2005), 20051110.
  • Burkhardt C, Müller M, Badde A, Garner CC, Gundelfinger ED, Püschel AW. Semaphorin 4B interacts with the post-synaptic density protein PSD-95/SAP90 and is recruited to synapses through a C-terminal PDZ-binding motif. FEBS Lett. 2005 Jul 4;579(17):3821-8.
  • Erbs S, Linke A, Adams V, Lenk K, Thiele H, Diederich KW, Emmrich F, Kluge R, Kendziorra K, Sabri O, Schuler G, Hambrecht R. Transplantation of blood-derived progenitor cells after recanalization of chronic coronary artery occlusion: first randomized and placebo-controlled study. Circ Res, 97 (2005), 8, S. 756-762.
  • Garbade J, Schubert A, Rastan AJ, Lenz D, Walther T, Gummert JF, Dhein S, Mohr FW. Fusion of bone marrow-derived stem cells with cardiomyocytes in a heterologous in vitro model. Eur J Cardio-Thorac, 28 (2005), 5, S. 685-91.
  • Gessner C, Scheibe R, Wötzel M, Hammerschmidt S, Kuhn H, Engelmann L, Hoheisel G, Sack U. Exhaled breath condensate cytokine patterns in chronic obstructive pulmonary disease. Resp Med, 99 (2005), 10, S. 1229-1240.
  • Gielen S, Adams V, Linke A, Erbs S, Mobius-Winkler S, Schubert A, Schuler G, Hambrecht R. Exercise training in chronic heart failure: correlation between reduced local inflammation and improved oxidative capacity in the skeletal muscle. Eur J Cardiov Prev R,12 (2005), 4, S. 393-400.
  • Hambrecht R, Schulze PC, Gielen S, Linke A, Mobius-Winkler S, Erbs S, Kratzsch J, Schubert A, Adams V, Schuler G. Effects of exercise training on insulin-like growth factor-I expression in the skeletal muscle of non-cachectic patients with chronic heart failure. Eur J Cardiov Prev R,12 (2005), 4, S. 401-6.
  • Hammerschmidt S, Kuhn H, Sack U, Schlenska A, Gessner C, Gillissen A, Wirtz H. Mechanical stretch alters alveolar type II cell mediator release toward a proinflammatory pattern. Am J Resp Cell Mol, 33 (2005), 2, S. 203-210.
  • Hemdan NY, Emmrich F, Adham K, Wichmann G, Lehmann I, El-Massry A, Ghoneim H, Lehmann J, Sack U. Dose-dependent modulation of the in vitro cytokine production of human immune competent cells by lead salts. Toxicol Sci, 86 (2005), 1, S. 75-83.
  • Holtick U, Vockerodt M, Pinkert D, Schoof N, Sturzenhofecker B, Kussebi N, Lauber K, Wesselborg S, Löffler D, Horn F, Trümper L, Kube D. STAT3 is essential for Hodgkin lymphoma cell proliferation and is target of tyrphostin AG17 which confers sensitization for apoptosis. Leukemia, 19 (2005), 6, S. 936-944.
  • Lange F, Bajtner E, Caspar T, Rintisch C, Nandakumar KS, Sack U, Holmdahl R. Methotrexate ameliorates T cell dependent autoimmune arthritis and encephalomyelitis but not antibody induced or fibroblast induced arthritis. Ann Rheum Dis, 64 (2005), 4, S. 599-605.
  • Lenk K, Adams V, Lurz P, Erbs S, Linke A, Gielen S, Schmidt A, Scheinert D, Biamino G, Emmrich F, Schuler G, Hambrecht R. Therapeutical potential of blood-derived progenitor cells in patients with peripheral arterial occlusive disease and critical limb ischaemia. Eur Heart J, 26 (2005), 18, S. 1903-1909.
  • Lenz D, Barten MJ, Hiller S, Tarnok A, Sack U. Regenerative and predictive medicine of cardiovascular disease: the 9th Leipziger Workshop and the 2nd International Workshop on slide based cytometry. Cytom Part A, 64 (2005), 2, S. 110-114.
  • Linke A, Adams V, Schulze PC, Erbs S, Gielen S, Fiehn E, Mobius-Winkler S, Schubert A, Schuler G, Hambrecht R. Antioxidative effects of exercise training in patients with chronic heart failure. Increase in radical scavenger enzyme activity in skeletal muscle. Circulation, 111 (2005), 14, S. 1763-70.
  • Mittag A, Lenz D, Gerstner AO, Sack U, Steinbrecher M, Koksch M, Raffael A, Bocsi J, Tarnok A. Polychromatic (eight-color) slide-based cytometry for the phenotyping of leukocyte, NK, and NKT subsets. Cytom Part A, 65 (2005), 2, S. 103-115.
  • Moche M, Hui DSC, Huse K, Chan KS, Choy DKL, Tannapfel A, Scholz GH, Gosse H, Sack U, Hoheisel G. Matrix metalloproteinases and their inhibitors in lung cancer with malignant pleural effusion. Pneumologie, 59 (2005), 8, S. 523-528.
  • Pelz O, Wu M, Nikolova T, Kamprad M, Ackermann M, Egger D, Emmrich F, Wobus AM, Cross M. Duplex polymerase chain reaction quantification of human cells in a murine background. Stem Cells, 23 (2005), 6, S. 828-833.
  • Pohlers D, Siegling A, Buchner E, Schmidt-Weber CB, Palombo-Kinne E, Emmrich F, Brauer R, Kinne RW. Expression of cytokine mRNA and protein in joints and lymphoid organs during the course of rat antigen-induced arthritis. Arthritis Res Ther, 7 (2005), 3, S. 445-457.
  • Rastan AJ, Walther T, Kostelka M, Garbade J, Schubert A, Stein A, Dhein S, Mohr FW. Morphological, electrophysiological and coupling characteristics of bone marrow-derived mononuclear cells-an in vitro-model. Eur J Cardio-Thorac, 27 (2005), 1, S. 104-10.
  • Sack U, Hirth A, Funke B, Wiedemeyer K, Lange F, Troltzsch M, Tannapfel A, Gebhardt R, Emmrich F, Lehmann J. A novel model of fibroblast-mediated cartilage destruction. Scand J Immunol, 61 (2005), 1, S. 18-28.
  • Sack U, Hoffmann M, Zhao XJ, Chan KS, Hui DS, Gosse H, Engelmann L, Schauer J, Emmrich F, Hoheisel G. Vascular endothelial growth factor in pleural effusions of different origin. Eur Respir J, 25 (2005), 4, S. 600-604.
  • Sack U, Sehm B, Kahlenberg F, Murr A, Lehmann J, Tannapfel A, Uberla K, Moessner A, Dietrich A, Emmrich F, Lange F, Jungel A, Braun JM, Anderegg U. Investigation of arthritic joint destruction by a novel fibroblastbased model. Ann NY Acad Sci 1051 (2005), 1, S. 291-298.
  • Schastak S, Jean B, Handzel R, Kostenich G, Hermann R, Sack U, Orenstein A, Wang YS, Wiedemann P. Improved pharmacokinetics, biodistribution and necrosis in vivo using a new near infra-red photosensitizer: tetrahydroporphyrin tetratosylat. J Photoch Photobio B, 78 (2005), 3, S. 203-213.
  • Schneider A, Sack U, Rothe K, Bennek J. Peritoneal taurolidine lavage in children with localised peritonitis due to appendicitis. Pediatr Surg Int 21 (2005), 6, S. 445-448.
  • Stolzing A, Sethe S, Grune T. Chronically active - role of oxidative stress in age and neuropathology. Redox Rep, 10 (2005), 4, S. 207-13.
  • Wötzel M, Schröder S, Sack U. Differentiation of anti-platelet antibodies using microspheres and flow cytometry. J Lab Clin Med (2005), 29, S. 368-376.
  • zur Nieden NI, Kempka G, Rancourt DE, Ahr HJ. Induction of chondro-, osteoand adipogenesis in embryonic stem cells by bone morphogenetic protein-2: Effect of co-factors on differentiating lineages. BMC Dev Biol 5 (2005), 1, S. 1-15.

Publikationen 2006

  • Baumann JG. Intracellular restriction factors in mammalian cells – an ancient defense system finds a modern foe. Curr HIV Res, 4 (2006), 2, S. 141-168.
  • Birkenmeier G, Nicklisch S, Pockelt C, Mossie A, Steger V, Glaser C, Hauschildt S, Usbeck E, Huse K, Sack U, Bauer M, Schafer A. Polymyxin B-conjugated alpha 2-macroglobulin as an adjunctive therapy to sepsis: modes of action and impact on lethality. J Pharmacol Exp Ther, 318 (2006), 2, S. 762-771.
  • Bocsi J, Lenz D, Mittag A, Varga VS, Molnar B, Tulassay Z, Sack U, Tarnok A. Automated four-color analysis of leukocytes by scanning fluorescence microscopy using quantum dots. Cytom Part A, 69 (2006), 3, S. 131-134.
  • Bocsi J, Mittag A, Sack U, Gerstner AO, Barten MJ, Tarnok A. Novel aspects of systems biology and clinical cytomics. Cytom Part A, 69 (2006), 3, S. 105-108.
  • Boltze J, Kowalski I, Forschler A, Schmidt U, Wagner D, Lobsien D, Emmrich J, Egger D, Kamprad M, Blunk J, Emmrich F. The stairway: a novel behavioral test detecting sensomotoric stroke deficits in rats. Artif Organs, 30 (2006), 10, S. 756-763.
  • Brocke-Heidrich K, Ge B, Cvijic H, Pfeifer G, Loffler D, Henze C, McKeithan TW, Horn F. BCL3 is induced by IL-6 via Stat3 binding to intronic enhancer HS4 and represses its own transcription. Oncogene, 25 (2006), 55, S. 7297-7304.
  • Colsman A, Sticherling M, Stopel C, Emmrich F. Computer-assisted learning in medicine : how to create a novel software for immunology. Arch Dermatol Res, 298 (2006), 1, S. 1-6.
  • Cormier JT, zur Nieden NI, Rancourt DE, Kallos MS. Expansion of undifferentiated murine embryonic stem cells as aggregates in suspension culture bioreactors. Tissue Eng, 12 (2006), 11, S. 3233-3245.
  • Dietrich A, Stockmar C, Aust G, Endesfelder S, Guetz A, Sack U, Schoenfelder M, Hauss J. Intraoperative subcutaneous or intrasplenic vaccination with modified autologous tumor cells leads to enhanced survival in a mouse tumor model. J Cancer Res Clin, 132 (2006), 6, S. 379-388.
  • Ehlers J, Alt M, Trepnau D, Lehmann J. Anwendung neuer Immunglobulin-isotypspezifischer ELISA-Systeme zur Erkennung von Salmonelleninfektionen bei Schweinen. Berl Munch Tierarztl 119 (2006), 11-12, S. 461-466.
  • Emmrich F. Regenerative Medizin – Made in Germany. Zeitschrift für Regenerative Medizin, 1. Jahrg. (2006), 1.
  • Funke B, Jungel A, Schastak S, Wiedemeyer K, Emmrich F, Sack U. Transdermal photodynamic therapy-a treatment option for rheumatic destruction of small joints? Laser Surg Med, 38 (2006), 9, S. 866-874.
  • Giese M, Liebert UG, Schneider T, Bock K, Zahn N, Uhlig A, Schusser GF. Therapeutical immunization of EAV-infected horses by DNA-Vaccination. Reprod Domest Anim 41 (2006), 4, S. 297-298.
  • Härtig W, Lehmann J, Stieler J, Singer D, Grosche J, Arendt T, Hoffmann R. Simultaneous detection of tau phospho-epitopes with haptenylated antibodies. Neuroreport, 17 (2006), 9, S. 869-875.
  • Hemdan NY, Emmrich F, Sack U, Wichmann G, Lehmann J, Adham K, Lehmann I. The in vitro immune modulation by cadmium depends on the way of cell activation. Toxicology 222 (2006), 1-2, S. 37-45.
  • Hiemann R, Hilger N, Sack U, Weigert M. Objective quality evaluation of fluorescence images to optimize automatic image acquisition. Cytom Part A, 69 (2006), 3, S. 182-184.
  • Kirsten H, Dienst S, Emmrich F, Ahnert P. CalcDalton: a tool for multiplex genotyping primer design for single-base extension reactions using cleavable primers. Biotechniques, 40 (2006), 2, S. 158-160.
  • Koschny R, Holland H, Koschny T, Vitzthum HE. Comparative genomic hybridization pattern of non-anaplastic and anaplastic oligodendrogliomas – a meta-analysis. Pathol Res Pract, 202 (2006), 1, S. 23-30.
  • Lange F, Hartl S, Ungethuem U, Kuban RJ, Hammerschmidt S, Faber S, Morawietz L, Wirtz H, Emmrich F, Krenn V, Sack U. Anti-TNF effects on destructive fibroblasts depend on mechanical stress. Scand J Immunol, 64 (2006), 5, S. 544-553.
  • Lehmann J, Springer S, Werner CE, Lindner T, Bellmann S, Straubinger RK, Selbitz HJ, Alber G. Immunity induced with a Salmonella enterica serovar enteritidis live vaccine is regulated by Th1-cell-dependent cellular and humoral effector mechanisms in susceptible BALB/c mice. Vaccine, 24 (2006), 22, S. 4779-4793.
  • Mishto M, Bellavista E, Santoro A, Stolzing A, Ligorio C, Nacmias B, Spazzafumo L, Chiapelli M, Licastro F, Sorbi S, Pession A, Ohm T, Grune T, Franceschi C. Immunoproteasome and LMP2 polymorphism in aged and Alzheimer’s disease brains. Neurobiol Aging, 27 (2006), 1, S. 54-66.
  • Mittag A, Lenz D, Bocsi J, Sack U, Gerstner AO, Tarnok A. Sequential photobleaching of fluorochromes for polychromatic slide-based cytometry. Cytom Part A, 69 (2006), 3, S. 139-141.
  • Morawietz H, Erbs S, Holtz J, Schubert A, Krekler M, Goettsch W, Kuss O, Adams V, Lenk K, Mohr FW, Schuler G, Hambrecht R. Endothelial protection, AT1 blockade and cholesterol-dependent oxidative stress: the EPAS trial. Circulation, 114 (2006), 1, S. 1296-1301.
  • Mückstein U, Tafer H, Hackermüller J, Bernhart SH, Stadler PF, Hofacker IL. Thermodynamics of RNA-RNA binding. Bioinformatics 22 (2006), 10, S. 1177-1182.
  • Müller H, Johne R, Schusser G, Giese M, Linke S, Pauli G. West Nile Virus - Causative agent of a zoonosis with increasing significance? Deut Tierarztl Woch 113 (2006), 12, S. 435-439.
  • Pohl S, Fricke S, Hildebrandt G, Uharek L, Braun JM, Emmrich F. Permanent induction of specific immunotolerance to allograft and prevention of graft-versushost-disease. Zeitschrift für Regenerative Medizin (2006), 1, S. 60.
  • Poppek D, Keck S, Ermack G, Jung T, Stolzing A, Ullrich O, Davies KJ, Grune T. Phosphorylation inhibits turnover of the tau protein by the proteasome: influence of RCAN1 and oxidative stress. Biochem J 400 (2006), 3, S. 511-520.
  • Rulli SJjr, Muriaux D, Nagashima K, Mirro J, Oshima M, Baumann JG, Rein A. Mutant murine leukemia virus Gag proteins lacking proline at the N-terminus of the capsid domain block infectivity in virions containing wild-type Gag. Virology, 347 (2006), 2, S. 364-371.
  • Sack U, Biereder B, Elouahidi T, Bauer K, Keller T, Trobs RB. Diagnostic value of blood inflammatory markers for detection of acute appendicitis in children. BMC Surg 6 (2006), 15.
  • Sack U, Scheibe R, Wötzel M, Hammerschmidt S, Kuhn H, Emmrich F, Hoheisel G, Wirtz H, Gessner C. Multiplex analysis of cytokines in exhaled breath condensate. Cytom Part A, 69 (2006), 3, S. 169-172.
  • Seleverstov O, Zabirnyk O, Zscharnack M, Bulavina L, Nowicki M, Heinrich JM, Yezhelyev M, Emmrich F, O Regan R, Bader A. Quantum dots for human mesenchymal stem cells labeling. A size-dependent autophagy activation. Nano Lett, 6 (2006), 12, S. 2826-2832.
  • Selig L, Sack U, Gaiser S, Kloppel G, Savkovic V, Mossner J, Keim V, Bodeker H. Characterisation of a transgenic mouse expressing R122H human cationic trypsinogen. BMC Gastroenterol (2006), 6, S. 30ff.
  • Sethe S, Scutt A, Stolzing A. Aging of mesenchymal stem cells. Aging Res Rev (2006), 5, S. 91-116.
  • Singer D, Lehmann J, Hanisch K, Härtig W, Hoffmann R. Neighbored phosphorylation sites as PHF-tau specific markers in Alzheimer’s disease. Biochem Bioph Res Co (2006), 346, S. 819-828.
  • Stolzing A, Scutt A. Age-related impairment of mesenchymal progenitor cell function. Aging Cell (2006), 5, S. 213-224.
  • Stolzing A, Scutt A. Effect of reduced culture temperature on antioxidant defences of mesenchymal stem cells. Free Radical Bio Med, 41 (2006), 2, S. 326-38.
  • Stolzing A, Scutt A. Glucose-induced replicative senescence in mesenchymal stem cells. Rejuv Res, 9 (2006), 1, S. 31-35.
  • Stolzing A, Sethe S, Scutt A. Stressed stem cells: temperature response in aged mesenchymal stem cells. Stem Cells Dev, 15 (2006), 4, S. 478-87.
  • Stolzing A, Widmer R, Jung T, Grune T. Tocopherol-mediated modulation of age-related changes in microglial cells: turnover of extracellular oxidized protein material. Free Radical Bio Med 40 (2006), 12, S. 2126-2135.
  • Stolzing A, Widmer R, Jung T, Voss P, Grune T. Degradation of glycated bovine serum albumin in microglial cells. Free Radical Bio Med, 40 (2006), 6, S. 1017-1027.
  • Walther T, Schubert A, Wustmann T, Falk V, Walther C, Doll N, Rastan A, Gummert J, Mohr FW. Reverse remodeling of cardiac collagen protein expression after surgical therapy for experimental aortic stenosis. J Heart Valve Dis, 15 (2006), 5, S. 651-6.